Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3491 |
Symbol | |
ID | 4029344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 3839907 |
End bp | 3840878 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637971902 |
Product | PDZ/DHR/GLGF |
Protein accession | YP_578680 |
Protein GI | 92118951 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTCAT TGACCGAGTG GAAGGTGCCG GCCGCGGCGC AGCCACACCA TGGCGACTAC GAATTCGATC TGGACCGCGC GCTGTCCGCG GTGGTTGGGC TGCATTCGAT CATTCCGGCC GACGCCTTTA CCGCGGACAC CCTCGGCGCC GAGCGCGCAG GCAACGGCGT CGTGATCGAC GACGGCCTCG TTCTGACCAT CGGGTACCTC ATCACCGAGG CGGAAACGGT GTGGCTGCAT CTCGCCGACG GCCGCGTGGT GCAGGCGGAC ACGCTCGGCA TCGACCGGGA GAGCGGCTTC GGTCTGGTGC AGGCGCTCGG CCGGCTCGAC CTCGAGCCGC TGCCGCTGGG TTCGTCGGCC GCGGCCGGAC TGAACGACCG GGTCGTGGTG GGCGGCGTCG GCGGCCGGAC CCGCTCGCTC GCCGGCCGTA TCGCCGCCAA GCAGGAGTTC GCCGGCTACT GGGAATACCT GATCGACGAC GCCATCTTCA CCCACCCGGC CCATCCCAAC TGGGGCGGCG CCGGCGTGAT ATCGGCGGCG GGCGAACTGA TCGGGATCGG CTCGCTGCAA CTCGAGCGCG AGCACGGCGG CCAGAGCGAG CATCTCAACA TGAACGTGCC GATCGATCTG CTGAAGCCTG CGCTCGACGA CCTGCGGAAA TTCGGACGGG TCAACAAGCC GGCCCGGCCC TGGCTCGGCA TCTACGCCAC CGAGATCGAG GACAGAATCG TCGCGGTCGG AATTGCGCCG AAGGGACCGG CTGCCCGCGC CGAACTCCGC ACCGGCGACG TGATCCTTGC GGTGAAGGGA GAAAAGGTGT CGGACCAGGC GCAGTTCTAC CGAAAATTAT GGGCACTGGG TCCCGCAGGC GTCGACGTGC CGCTGACGCT CTATCGCGAG GGGGACATCT TCGACGTGGT GGTGGCATCG ACCGACCGCG ACCGGATGCT GAAGAAGCCG CAGCTCCACT GA
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Protein sequence | MASLTEWKVP AAAQPHHGDY EFDLDRALSA VVGLHSIIPA DAFTADTLGA ERAGNGVVID DGLVLTIGYL ITEAETVWLH LADGRVVQAD TLGIDRESGF GLVQALGRLD LEPLPLGSSA AAGLNDRVVV GGVGGRTRSL AGRIAAKQEF AGYWEYLIDD AIFTHPAHPN WGGAGVISAA GELIGIGSLQ LEREHGGQSE HLNMNVPIDL LKPALDDLRK FGRVNKPARP WLGIYATEIE DRIVAVGIAP KGPAARAELR TGDVILAVKG EKVSDQAQFY RKLWALGPAG VDVPLTLYRE GDIFDVVVAS TDRDRMLKKP QLH
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