Gene Nham_3370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3370 
SymbolfliI 
ID4029660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3708880 
End bp3710244 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content66% 
IMG OID637971780 
Productflagellum-specific ATP synthase 
Protein accessionYP_578560 
Protein GI92118831 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family
[TIGR03496] flagellar protein export ATPase FliI
[TIGR03498] flagellar protein export ATPase FliI 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCGCTA ATGCGCGGAA ACTTAAGGTT TTCACGGTGA AGGGCCTGGC CGAACAGGTC 
GGCGATATCG AGCGCGTCAA TATTTATGGC CGCGTGGTTG GCGTACGCGG CCTGATGGTC
GAGATAGCCG GCCCCATCCA TGCGATGTCG GTCGGCGCCC GAATCCTGAT CGAGACCGGC
GGCGACCGTG TCATCCCGGC GGAGGTGGTT GGCTTCAACG GCGACAATGC CGTGGTCATG
CCGTTCGCCG GCCTTGACGG GGTGCGGCGC GGCTGCCGCG CCGTGATCGC CAATGCCTCC
AGCCAGGTGC GCCCGGCTCC CTCCTGGCTC GGCCGTGTTC TCAACGCCAT GGGCGAGCCG
ATCGACGGCA AGGGAGCGTT GCCGCAAGGG CCGGTGCCGG TGCCGTTCCG CAATTCGCCG
CCGCCGGCGC ATTCGCGCAA GCGGGTCGGC AAACCGCTCG ACCTCGGCGT TCGCGCGCTG
AACACGTTCC TGACCTGCTG CCGCGGCCAG CGGCTCGGTA TCTTCGCCGG TTCCGGCGTC
GGCAAATCGG TGCTGCTGTC GATGCTGGCG CGCAACGCGG ACGCCGACAT TTCGGTGATC
GGGCTGGTCG GCGAACGCGG CCGCGAGGTG CAGGAATTCC TGCAGGACGA CCTCGGCGAG
GAGGGGCTCG CACGATCGGT CGTCGTGGTC GCGACCTCCG ACGAGCCCGC CCTGATGCGG
CGGCAGGCTG CCTATCTGAC CCTGGCCGTC GCGGAATATT TCCGCGACGA GGGCAAGGAC
GTCATGTGCA TGATGGATTC GGTGACGCGG TTCGCGATGG CGCAGCGCGA AATCGGATTG
TCGACCGGCG AGCCGCCGAC CACGAAGGGT TACACGCCGA CCGTGTTCAC CGAACTGCCG
AGGCTTCTGG AGCGCGCCGG TCCCGGCGCC GCCGACAAGG GAACCATCAC CGGTATTTTC
ACGGTGCTGG TGGACGGTGA CGATCACAAC GAGCCGGTGG CCGATGCGGT GCGCGGCATT
CTCGATGGCC ACATCGTGAT GCAGCGCGCC ATTGCCGAGC GCGGCCGCTA TCCCGCGATC
AATGTCCTGA AGTCGGTGTC GCGCACCATG CCGAAATCCG CCGATCCTGC CTTCCTGCCG
GTGATCACCC GCGGGCGGCA GGTGATGGCC ACCTTTTCCG ACATGGAGGA GTTGATCCGC
CTCGGCGCCT ATCGGACCGG GTCTAACGCC GAGGTCGACG AGGCGATCCG GCTCAATCCG
CTCCTGGAAG ATTTTCTGCG CCAGGCCAAG GACGAAGTCA CCAGCATCGA GGACGGTTAT
CGGCGGTTGC AGCAAATCCT TAAGACCTTG GAAACGGAAC GCTAA
 
Protein sequence
MPANARKLKV FTVKGLAEQV GDIERVNIYG RVVGVRGLMV EIAGPIHAMS VGARILIETG 
GDRVIPAEVV GFNGDNAVVM PFAGLDGVRR GCRAVIANAS SQVRPAPSWL GRVLNAMGEP
IDGKGALPQG PVPVPFRNSP PPAHSRKRVG KPLDLGVRAL NTFLTCCRGQ RLGIFAGSGV
GKSVLLSMLA RNADADISVI GLVGERGREV QEFLQDDLGE EGLARSVVVV ATSDEPALMR
RQAAYLTLAV AEYFRDEGKD VMCMMDSVTR FAMAQREIGL STGEPPTTKG YTPTVFTELP
RLLERAGPGA ADKGTITGIF TVLVDGDDHN EPVADAVRGI LDGHIVMQRA IAERGRYPAI
NVLKSVSRTM PKSADPAFLP VITRGRQVMA TFSDMEELIR LGAYRTGSNA EVDEAIRLNP
LLEDFLRQAK DEVTSIEDGY RRLQQILKTL ETER