Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3322 |
Symbol | |
ID | 4032777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 3665062 |
End bp | 3667293 |
Gene Length | 2232 bp |
Protein Length | 743 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637971732 |
Product | Phage tail tape measure protein TP901, core region |
Protein accession | YP_578514 |
Protein GI | 92118785 |
COG category | [S] Function unknown |
COG ID | [COG5283] Phage-related tail protein |
TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.787637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAACTC TCACCTCCAA GCTCATCGTT GAGCTGATCG ACCGGGCGTC GGCGCCATCG CGCGCCATCG CCGGGGCGGT CAATCGGTTG ACAGCGATGC AGTCGCGCAA CGCCGCGGCG CTGGCGTCGG CGCAGACGCA GATGTTTGGC GCGGTGGCCG TTGCCTATGG CTTGGCGAAG GCGATCGGAG CGCCAATCAA GGCGGCGGTC GATTTCGAGA CCAAGCTGGA AGACATCGGG CAGAAGATCA ACGCACCGGT CTCCGAGCTT CCAAAACTGG GCGAGGAGCT GCGCGCCGTG GCGCGTCAGA CGACGCAGAC GGCGTCGCAG ATGGCCGAAG GCATGGACGT GCTCGCCGGC ATGGGTGCGA ACCGTGAAGA TGCGCTCGGC CTGCTGCCGG CGATCGGCAG GGCCGCGACG GCGTATAATG CGGACGTGAA GGAATTGTCA CAGGCCGGCT ATGCCGCGCT CGATAATCTG AAAGTGCCGG CCGATCAGTT CGCGCGCGCG CTTGACGCCA TGGCGCAAGC CGGCAAGGCT GGTGCCTTCG AACTGAAGGA TATGGCGAGA TATTTTCCGG GGCTCGGCGC TGCCTATCAG GGCCTCAAGC AATCCGGCGT GCCGGCCGTC GCCGATCTGG CGGCCGCGCT GCAGATCGTG CGGAAGGGCA CCGGCGAAAG CGCAGAGGCC GCGACGAATC TGCAGAACGT TCTGCAAAAG ATCAACTCAC CGCTGACCCG CAAGAATTTC GAGAAAATGG GCGTTAATCT CGAAAAGGAG ATGGCGCGAG CGGCGAAGGC CGGCGCCACG CCGATCGAGG CGATCGCGGT GCTGACGAAT AAAGTGCTGA AGGGCAACCT CGGGCGGCTT GGTGATCTGT TCAACGATTC TGAAGTTCAG AAGGCGTTGC GACCGTTGAT TCAGAACATC GATGAGTATC GGCGCATTCG GAAAGAGGCA CTGGCGGCGC AGGGTGTGGT CGAGGAAGAT TATCAGCGGC GGCTGAAAAC GGGCGCGGCG GCGGTCCAGC GGTTTCGGAT CGCGATTGAA AATATCAACC TGGCGGTCGG CGCAGCGCTG TTGCCCGGCC TAACCACGTT GGCCGATGCC CTGGTGCCGA TCTCCAACCG CATGGCAGCG TTCGGCGAGA AACACCCGGC AGTGACGCGC GCTGTGGTGG CGACCGCTGC GGGGCTGATC GGACTGCGCA TCGCCGGCTT CGCGGCCGCG TTCGGTCTCC GGTGGATGTG GGGCGGAGCA TTGGCCGTTG GCATTGCCAG CATGAAGGCG CTGGGCGTCG CGGTAAAGGT GGCGTCGGTC GCGCTCTGGC CCTTCGGCGC AGCCTTCCGG GCTGCGCGTT CTGCGATACT GGCGACACGC GCAGCCATTC TGGCATTTGC GGTATCCGCA GCGATGCTGG GCACTGGCGG CGCTCTTAGG GCTGCAGCGG CGTCCATTTT CAGCATGGCG ACTGCCATGC GGGTGCTCAA GTTCGCCGTG ATCGGTACCG GAATCGGCGC CGCTTTGGTT GGCCTCGCCG CAATCGGAAT GGCCGTCTAC AATAATTGGG CGGGCATAAA GGCGCTATTT GTCGGCATTG GCGAGGGCCT TATGGCTGGA CTTGCGCCGG TGATGCCGAC AATCCAGCCC ATCATCGATG GCTTCAATTG GTTGTCAAAC ACCCTGTCGT CGATATTCGA GCCGATCGAT GCATCGAAGG AAGGCTGGCG GTCGCTTGGC GTCACGATCG GCACCAGTAT TGGCGGCGCG ATCACCAGCG TGATCGAGAA AATCAAATCG TTGATCGGGT GGATCACGTC GGTGCCCGGC AAGATTGCCG GCATGTTGGG CTTTGGCGGC TCTGGTAAGA CGCCTGCTGG TGCGGCCGCG ACCGTGGCCG CACCCGTCAT CGCCGGCACT CGTGCGGCCG GCGGGCCGGT GAGGGCGGGC AGCACCTATC TCGTCGGCGA GAACGGTCCC GAGCTTTTCC GGGCGCGGGC AAGTGGCGCG ATCTCCAACA CGCTCGACAC CGTGCGGGCC ATCAAGGCGC AGGCCATGGC TGGCGCGGTG AAGGCAGGCG GTGGCGGTGC GACGGTCACC AACACCGTCA CAATCCATGT GCAGGCAGCG CCGGGTCAGT CGCCCGAGGC AATCGCCTCA GCCGTCGAGA AACAGCTTAG TTCAAAGCTG AATGCGCTCT CGCGTGGCGC CTATAGCGAC GGGGTGTATT GA
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Protein sequence | MATLTSKLIV ELIDRASAPS RAIAGAVNRL TAMQSRNAAA LASAQTQMFG AVAVAYGLAK AIGAPIKAAV DFETKLEDIG QKINAPVSEL PKLGEELRAV ARQTTQTASQ MAEGMDVLAG MGANREDALG LLPAIGRAAT AYNADVKELS QAGYAALDNL KVPADQFARA LDAMAQAGKA GAFELKDMAR YFPGLGAAYQ GLKQSGVPAV ADLAAALQIV RKGTGESAEA ATNLQNVLQK INSPLTRKNF EKMGVNLEKE MARAAKAGAT PIEAIAVLTN KVLKGNLGRL GDLFNDSEVQ KALRPLIQNI DEYRRIRKEA LAAQGVVEED YQRRLKTGAA AVQRFRIAIE NINLAVGAAL LPGLTTLADA LVPISNRMAA FGEKHPAVTR AVVATAAGLI GLRIAGFAAA FGLRWMWGGA LAVGIASMKA LGVAVKVASV ALWPFGAAFR AARSAILATR AAILAFAVSA AMLGTGGALR AAAASIFSMA TAMRVLKFAV IGTGIGAALV GLAAIGMAVY NNWAGIKALF VGIGEGLMAG LAPVMPTIQP IIDGFNWLSN TLSSIFEPID ASKEGWRSLG VTIGTSIGGA ITSVIEKIKS LIGWITSVPG KIAGMLGFGG SGKTPAGAAA TVAAPVIAGT RAAGGPVRAG STYLVGENGP ELFRARASGA ISNTLDTVRA IKAQAMAGAV KAGGGGATVT NTVTIHVQAA PGQSPEAIAS AVEKQLSSKL NALSRGAYSD GVY
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