Gene Nham_3206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3206 
Symbol 
ID4033372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp3533127 
End bp3533810 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content69% 
IMG OID637971619 
ProductTetR family transcriptional regulator 
Protein accessionYP_578401 
Protein GI92118672 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTATC GGCGGACCCA TCAGGTCTTG AAGCGCCTCG CGGCGCGGCG CCGCGCCATC 
CTGGCGGCAG CGCGGGATAC GGCCAGCAAC AGCGGCATGG CGGCAGTGCA GATCGCACCG 
GTCGCGCTTC GCGCCAATGT CGCGGCCGGC ACCGTCTATC GTTATTTTCC CTCGAAAGCG 
GATCTGATTT CCGAACTGAT CATGGAGGTT GCGCGCGACG AGCTGGCCGC GATACGTGCT 
GCCGCCGACG CCGCGCCGGG TCCATCTTCG GCGCTCGCGG CCGCGGTCGC TACCGTCGCC 
GTGCATATGG TGTCGCACCG GAAACTGGCG TGGGGTATTC TGGCCGAGCC GGTCGATGTC 
GATGTGGCTG CGACGCGGTT GGCAAGCCGC CGCGACATCG CCGGCGAGAT TGAAACGCGT 
ATCATCGCCG CGGTGCGCGC CGGACATCTG CCGGCGCAGG ATACGTCGCT GGCCGCTACC 
GCGCTGCTTG GCGCACTGAA TGAATCTCTT GTCGGCCCGC TGGCGCCCGA CAACCTCGAT 
GATCCGGCGA GGCTCCGCGA CGTGGTGCAG ACAGCGACCC TGCTGGCGTT GCGCGCGGTC 
GGCGTGACGG ATGCCCGCGC CCGCGGTCTT GTGGTGCAGG CCGCCCTGCC GGCAAGGATG 
CCGGCAGGGG AGCACACGGG CTGA
 
Protein sequence
MVYRRTHQVL KRLAARRRAI LAAARDTASN SGMAAVQIAP VALRANVAAG TVYRYFPSKA 
DLISELIMEV ARDELAAIRA AADAAPGPSS ALAAAVATVA VHMVSHRKLA WGILAEPVDV 
DVAATRLASR RDIAGEIETR IIAAVRAGHL PAQDTSLAAT ALLGALNESL VGPLAPDNLD 
DPARLRDVVQ TATLLALRAV GVTDARARGL VVQAALPARM PAGEHTG