Gene Nham_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3008 
Symbol 
ID4032581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3312453 
End bp3312917 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content60% 
IMG OID637971438 
Producttransposase IS3/IS911 
Protein accessionYP_578220 
Protein GI92118491 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCAGA TAACCGTTAG GCTTAGAATG GACACAGTGG ATGATGCTAT CACTAAGCCG 
GTTCATCGGC TTGAGGTGTT CACCGGTGCA GGCCGCCGGC GCACGTGGAG CGACGAGGAC
AAGGCACGGA TCGTCGCTGA GATCGTAGGG AGCGGCGAGT CTGTTTCTGC CGTAGCTCGA
CGGCACGGGC TTTCGCCGCA GCAATTATTT GGCTGGCGGC GGGAATTGCA AGGATCCCAG
ACTGCGCATT CGCATGCTGA AGAGCTGCGG TTCGTTCCGG CAGCCCTGGA CGTGGCACCG
TCTTCTCCGC CTGTCCGTTG TCAACGCAAG GTACCGCGGC ACCAGTTTGA GCTTGGTGTG
GGAATGATCG AGGTCGAGAT CGACGGCGTC ACGGTTCGGG TTGGCCGCGG TGCGGATGCA
AAGACCGTGA CAGCAGTGCT GCGGGCGTTG AAAGCCACAG CATGA
 
Protein sequence
MVQITVRLRM DTVDDAITKP VHRLEVFTGA GRRRTWSDED KARIVAEIVG SGESVSAVAR 
RHGLSPQQLF GWRRELQGSQ TAHSHAEELR FVPAALDVAP SSPPVRCQRK VPRHQFELGV
GMIEVEIDGV TVRVGRGADA KTVTAVLRAL KATA