| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2470 |
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| Symbol | |
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| ID | 4033161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2732871 |
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| End bp | 2734565 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637970929 |
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| Product | phage integrase |
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| Protein accession | YP_577720 |
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| Protein GI | 92117991 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACAAC GAATCCCTCA CCTTTTGGAA CGCGAAGGCC GCTATTACGC CCGGATCGTC
ATCCCCAAGC CCCTGCGGAC TTTCTTTGAG GACAAGTGGG AAATGTCCGA TCCGCTGGGC
GCGGATCGTC GTGAGGCCCT TCGACGGCTC CCCGGCGCGG TGGCGGAAAT TCAGTCCCAA
CTAGGCGCGG CCCGCACCCA GCTTAAGGCC ACCTACCGGC CCAAGGTCCA AGCCCGACCG
GGCAAGCCGC TCACGGATCG CCAGATTGCG GCGCTGCACT ACGGGACGGA ACTGGGGCTG
GATGAATCGG AGCGCGCCGC CTACGCGACC GACACGCCCC CGGCCGATAT GTCAGCCTTC
CGTCCGGGGT ATGAGGATAC CCTTCGCAAG GTGGTGAGCG GCAAGGCGAC GAATGACGAA
ATGGCCGCTG CGGTCGGCTG GATTATCGAT TCAATGCGGG AGAACGGACA TACCGACGTT
GAGCGTGGCA CCGAGAAATG GCGCGCGCTG GCGCGGACCA TGGCTGGCGT CCAGCTTGAA
GTATTCCAGC GCCAGAGCGA GCGGGATCAC GGCAGAGACG ATGCCCCGCC CCAGCATTCC
GCCTTGGCAC CTATCAAGCC ACCGGAAACC GATCCGCTGG CGGCGCGAAT GCTGGACGGC
GAAAGCAACC AGTCCCTCAG CGAGATTTTC AAGCGCTACA GCGCCGAACG GAAGGCCACG
CCCGCGACCA CGCAAGAGTG CGAGGTCGCT ATCCGCATGT TTGAGGAACA CCTAGGGAAG
CCCAAACCGC TCTACCGGAT CACGCGACAG GACGTTCAAG GCTTCAAGCG GGCGCTACTG
GAAACGCCGA TTCATTACCG GAAGCGGTTT CCCGGCAAGA CGCTGCCCGA AGCCATCGTC
GCGAACAAGA AGCGCAAAGA ACCATATGAG CCGCTGGTCG CACGGACGAT CAATAACAAG
ATCCTCTCGC GCATTCACTC GTTGCTGGAA TGGTGCGTTA AGAATGATCT CATTCCGGAC
AATCCGGCCG CAAAAATCAG GGTCGATTTC GTCCAGAGCG CGGAACCAAG CCGCCTGCCC
TTCACCGGTG ACGATCTCAA GCTGATCTTC CCGCCCGCAA TGTTTCAAAA GAAGCTGGGC
GAGTTCGAAT GGGCGATGCT GATTTCGCTC TATGGCGGGA TGCGCGCCAG TGAACTGGCG
CAAATCAAGT TAAGCAGCAT CCGGCATGAA CGCGGCGTTC TTATCTTTGA CATTGAGGAA
AAGACCAAGA ATGCAGGATC GAAGCGCATT GTCCCGGTCC ATAGCGAGCT AATCCGTCAC
GGCCTAAATA AGCGCATCAG CGCGTTAAAA GCGGCTGGCG AGACGCATCT GTTTCCGAAG
TGGTATGGCG ACGGCATGAA GGCTAAGCAA GCGGCGACGG AATACGGCAC CGCCTCGTTG
AACCAGTATT TCCCTCGGTT CATTCCCCGG AAGTTCAATC GGGACTACCT GCCAAAGCTA
GGCATTGGCG ATCGCAAGGT GTGGCATTCG CTACGGCATA CGTTCAAAAC GCAACTGTCG
CGCGGCGGTG TGGACAAGGC GACACGCGAC TACTTGACCG GCCACGTTGA TGGCTCAGCC
GGTGCGGTAT ACGTGCATGA CGTGTCAGTG GAAGCAATGG CTAGCGCCGT TGAGCGCATC
ACGTTTGACC TTTAA
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| Protein sequence | MPQRIPHLLE REGRYYARIV IPKPLRTFFE DKWEMSDPLG ADRREALRRL PGAVAEIQSQ
LGAARTQLKA TYRPKVQARP GKPLTDRQIA ALHYGTELGL DESERAAYAT DTPPADMSAF
RPGYEDTLRK VVSGKATNDE MAAAVGWIID SMRENGHTDV ERGTEKWRAL ARTMAGVQLE
VFQRQSERDH GRDDAPPQHS ALAPIKPPET DPLAARMLDG ESNQSLSEIF KRYSAERKAT
PATTQECEVA IRMFEEHLGK PKPLYRITRQ DVQGFKRALL ETPIHYRKRF PGKTLPEAIV
ANKKRKEPYE PLVARTINNK ILSRIHSLLE WCVKNDLIPD NPAAKIRVDF VQSAEPSRLP
FTGDDLKLIF PPAMFQKKLG EFEWAMLISL YGGMRASELA QIKLSSIRHE RGVLIFDIEE
KTKNAGSKRI VPVHSELIRH GLNKRISALK AAGETHLFPK WYGDGMKAKQ AATEYGTASL
NQYFPRFIPR KFNRDYLPKL GIGDRKVWHS LRHTFKTQLS RGGVDKATRD YLTGHVDGSA
GAVYVHDVSV EAMASAVERI TFDL
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