Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2418 |
Symbol | |
ID | 4030361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 2679165 |
End bp | 2680616 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637970877 |
Product | hypothetical protein |
Protein accession | YP_577668 |
Protein GI | 92117939 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4961] Flp pilus assembly protein TadG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00315022 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCTA CGTCAATTCG CGAACGGATA CGCAGTTCGG CCGTCCGTTT TGGCCAAGAT TTACGGGGTA ATATCGCACC GATTTTTGCG ATCGCTCTCC TGCCGATGCT CGGCTTCGTC GGAGCCGCCG TCGACTATAC GCGGGCGAAT GCAGCGCGCT CGTCGATGCA GGCGGCAATG GATTCGGCTG CCCTAATGGT TGCCAAGGAC GCCAACGCGG CGAGCCCACA GATGACAGCG GATCAGGTAA CTGCGGCGGC ACAGAAATAC TTCAATGCGC TGTATCACAA CACGGATGCC CAGGGCGCTT CTGTCAGCGC CGTATACACG CCCTATAACA ACGGGACGCC GGCGACCGTC GTCCTGTCCG GCTCGGGAAA CGTGCAGACC GACTTCATGA AGGTGGTGGG CTTTCCTCAG ATCAGCTTCA AAACAAACTC GACAGCGACC TGGGGCAACA CCAAGCTCCG CGTCGCCATG GCGCTGGACG TCACCGGTTC AATGTCCAGC GCCGGCAAAC TTGTCCAAAT GAAGATCGCG GCCAAAAAGC TGATTGATAC TCTCAAGGCG TCCGCTACGG CCGAAGGCGA CGTGTATATT TCGATCATCC CGTTCAACGT TATGGTCAAT GTGGGTGCCA ATAACAACAC TGCAAGCTGG CTCGAATGGG AAGACGGCAG CTACGACAAC AGCAGCAGCA ACTACGGCAG CTGCAGCGGG AGCGGCAAAT CCAAGCCGAA CACGAAAAGC TCGTGTATCG CCGCCGGTAA GACATGGACT CCCAAAAACA TCAGCAGTTG GAAAGGTTGC GTAACCGACC GCGGCCCTGT GTCGAAGCCC GGTAGCGGAG ACTATGACAC GACGAAAGAC GAGCCTGTCG CAAGTACACC TTATACGCTC TATCTCGCAC GGAACTATAG CACCTGCCCG TCATCGATCC TGCCGATGAC GTCGGCCTAC GACTCGAAGG AATCCGACAG TTCGACCGAC GACAGCACCC TCAAGGGCAA GATCAACAAC CTCGTAGCAA ACGGCGCCAC CAATCAGGCC ATCGCCATGC AAATGGCCTG GATGATGCTA CAGCCCACGG CGCCGTTCCC GGCGCCCGCC AAGGACGAAA AATACAAATA TACCGACGCG ATCATCCTGC TGTCCGACGG CTTGAACACT CAGGATCGCT GGTACGGCAA CGGCTCAGAT TGGTCGTCAC AGGTCGACAC GCGGCAGGCC CTGCTCTGCA ACAACATCAA AAACGATCCG ATCAGCAAGA CCGATCCGAC CCGCAGGACG CGGATCTACA CCATCCAGGT CAACACCGAC GGCGATCCCG AATCCACCGT CCTGAAGAAC TGCGCGACCG ACGGCTTCTT CCCGACCAGT ACGGCAAGCG GAATTGCTTC CGCGTTCGCC CAGATCGGAG CGTCGCTCTC TCAGCTCCGC ATCGCGAAGT AA
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Protein sequence | MSATSIRERI RSSAVRFGQD LRGNIAPIFA IALLPMLGFV GAAVDYTRAN AARSSMQAAM DSAALMVAKD ANAASPQMTA DQVTAAAQKY FNALYHNTDA QGASVSAVYT PYNNGTPATV VLSGSGNVQT DFMKVVGFPQ ISFKTNSTAT WGNTKLRVAM ALDVTGSMSS AGKLVQMKIA AKKLIDTLKA SATAEGDVYI SIIPFNVMVN VGANNNTASW LEWEDGSYDN SSSNYGSCSG SGKSKPNTKS SCIAAGKTWT PKNISSWKGC VTDRGPVSKP GSGDYDTTKD EPVASTPYTL YLARNYSTCP SSILPMTSAY DSKESDSSTD DSTLKGKINN LVANGATNQA IAMQMAWMML QPTAPFPAPA KDEKYKYTDA IILLSDGLNT QDRWYGNGSD WSSQVDTRQA LLCNNIKNDP ISKTDPTRRT RIYTIQVNTD GDPESTVLKN CATDGFFPTS TASGIASAFA QIGASLSQLR IAK
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