Gene Nham_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2378 
Symbol 
ID4031127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2642581 
End bp2644017 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content65% 
IMG OID637970838 
Productphage tail sheath protein 
Protein accessionYP_577629 
Protein GI92117900 
COG category[R] General function prediction only 
COG ID[COG3497] Phage tail sheath protein FI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCTG TGTCCTTTCA CCACGGCACG CGCGTATTCC AGTCTGGCGA GACCCCGGTG 
TTGGTCCGCA CCGCGCAAAC CGCCGTCATC GGCCTGATCG GCACCGCGGC CGACGCCGAT
GAAGTCAAAT TCCCGCTCAA CAAGCCGATC CAGATCCTGC GGCCGAGCGA TGCCGAGGGG
CTGGGGAGCG ACGGCACGTT GATGGAAGCG ATCGACTCGA TCTTCGATCA GGTCGGCTGC
CCGATCATCC TGGTGCGTGT CGAGGAGGGC GCGACCACGC CGCTCACCTG GGCCAACGCG
GTCGGCAATC AGGTGTCGTT CACCGGCGTG CATGCCTTCC GCCGCGCCAA GCCGGATGGC
CTTTATAAGC CGAAGCTGCT GCTGGCCCCC GGCCTGACCC AGACGTCGCC GGCCGACGGC
ATCGCCTCGA TTGCGGTTGG CGTGGGTGGC TCCGGCTACG TCGCCGACAC CACGACGGTG
ACGATCGCTG GTACTGGCGG CGTCGGATCG GGCGCCGAGG CCGCGGCTGT CGTTGAGGCG
GGCATCATCA CCTCGATCCT CGTGACCAAA CCGGGTTATG GCTACACCGG TGCAGTCACC
GTTACCATCG CGGGCGACGG TGTGGATGCG ACGGCGACCG CCGCCAAGGG CTCGGTGATC
AACCCCGTCG TCGCCGAGCT GATGGGCGTC GCGGAAACGC TCAAGGCGAT GGCCTATGTC
GATGCGCCGG ACACCACCGA CCAGGCGGCG GTGCAGTATC GCGGCCTGAT CAACTCCGGC
CGCATCTTCG TGTGCGATCC GAAGGTGCTA AAATTCGACA CCGCCCAGGC GCTCAACGTG
CCGCAGCCGT CGTCGCCGAT CTTCGCCGCG CGCCAGGCCA AGATGGATCT GGAGCAGGGC
TTCTGGTGGG CGGGCTCGAA TACCGAGATC GCCGGCATCG TCGGCACCAA CCGGCCGATC
GAATACGGCG TCCAGTCGAA CTACCTCAAC GAAAATCGCG TCAACACCAT CGTCAACATC
GACAACACAG GGTTCCGGCT GTGGGGCGTG TGGACCTGCG ACAGCGATCT GCTCTGGCAG
TTCGTGTCGG TGCGCCGCAC CGCCGATGCC ATCAACGAGG CGCTCGAGGT GGCCTATCTC
GAATTCGTCG ACCGGCCGTT TTCAAAGGCA AACCTCAAGT TCATGATCGA GACCGGCCGC
GCCTTCCTCC GCACCATGGA GCTCGAGGGC GCGATCCTGC CCGGTCATGA CGTCTGGCTG
CTCGAGAGCA ACACCGACAA CGATCTGGCG CAGGGCATCG TCAAGCTGGG CGTCAAGTTC
GAGCCGCCGG CGCCGATGGT CGATATCCGC ATCACCAGCT ATCGCAACAT CGCCAGCTAT
ACCCTGCTGC TCAATCAGGT GGCGCAGGAA ATCAGCTCCG GTTCGCTGGC TGCGTAA
 
Protein sequence
MASVSFHHGT RVFQSGETPV LVRTAQTAVI GLIGTAADAD EVKFPLNKPI QILRPSDAEG 
LGSDGTLMEA IDSIFDQVGC PIILVRVEEG ATTPLTWANA VGNQVSFTGV HAFRRAKPDG
LYKPKLLLAP GLTQTSPADG IASIAVGVGG SGYVADTTTV TIAGTGGVGS GAEAAAVVEA
GIITSILVTK PGYGYTGAVT VTIAGDGVDA TATAAKGSVI NPVVAELMGV AETLKAMAYV
DAPDTTDQAA VQYRGLINSG RIFVCDPKVL KFDTAQALNV PQPSSPIFAA RQAKMDLEQG
FWWAGSNTEI AGIVGTNRPI EYGVQSNYLN ENRVNTIVNI DNTGFRLWGV WTCDSDLLWQ
FVSVRRTADA INEALEVAYL EFVDRPFSKA NLKFMIETGR AFLRTMELEG AILPGHDVWL
LESNTDNDLA QGIVKLGVKF EPPAPMVDIR ITSYRNIASY TLLLNQVAQE ISSGSLAA