| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2317 |
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| Symbol | |
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| ID | 4029689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2574303 |
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| End bp | 2576354 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637970778 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_577569 |
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| Protein GI | 92117840 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAAAC CACTGAAACA AAAAACAAAA CCGTCTAAGG ATCTGTTCGA CGCCTCGGAG
GCCAAGGGCC GTCCCACTGC CCGCGACTCG AGCCGCGCAT CGGGAGCCGA GGCCGACTAC
ACCGCCGCTG ACATCGAGGT GCTGGAGGGG CTTGAGCCGG TCCGCCGCCG CCCCGGCATG
TACATCGGCG GCACCGACGA GAAGGCGCTG CACCACCTGT TCGCCGAGGT GATCGACAAC
GCCATGGACG AGGCGCTGGC GGGGCACGCG ACCTTCATCG TGGTCGAACT GGCCGCCGAC
GGCTTCCTCA CCGTCACCGA CAACGGGCGC GGTATCCCGG TCGATCCGCA CCCGAAATTC
CCGAAGAAGT CGGCGCTCGA AGTCATCATG TGCACGCTGC ATTCGGGCGG CAAGTTCGAC
TCCAAGGTCT ACGAGACCTC GGGCGGGCTG CACGGCGTCG GCGTCTCCGT GGTCAACGCC
CTCTCCTCTC GCCTCGAAGT TGAAGTGGCG CGCAGCCAGA ATCTCTACAA GATGACCTTC
GAACGCGGTC ACCCCAGGGG CAGCCTCGAC GACCTCGGCA GGATCAGTAA CCGCCGCGGC
ACCACCATCC GCTTCAAGCC GGACACCGAC ATCTTTGGGC CCAAGGCCGC GTTCAAGCCG
CAGCGCCTGT TCAAGATGAC GCGCTCGAAA GCGTATCTGT TCGGCGGCGT CGAAATCCGC
TGGCGTTGCG CGCCTGACCT GCTCAAGGGC CTCGACGACA TTCCGGCGGA AGCGACCTTC
CACTTCCCCG GCGGCCTGAA AGACTATCTC GCCGCAGCGA TCCACAAGGA CACGCTCGTG
CATCCGGACA TCTTCTCCGG CAAGTCCGGC CGCAACGGCG CGCACGGCGC CTGCGAATGG
GCGGTGGCGT GGACGGCGGA CGCCGACGGA TTCCTGTCGT CCTACTGCAA CACGGTGCCG
ACGCCCGATG GCGGCACCCA CGAGTCGGGT CTGCGCAGCG CGCTGCTGCG CGGGCTGAAG
GATCACGCCG AACGCGTCGG CCAGGGCAAG CACGCCGCCT CCGTCACGTC CGAGGACCTG
ATGGTCGGGG CCGCCGCGAT GCTCTCGGTG TTCGTGCGAG AGCCCGAATT CCAGGGCCAG
ACCAAGGACC GCCTCGCCAC CTCTGAGGCC TCGCGGATCG TCGAGCAGGC GATCAAGGAC
CCGTTCGACC ACTGGCTGTC CGGCAATCCG GTGCAGGCCA ACAAGCTGCT CGATTTCGTG
ATCGAGCGCG CCGACGAGCG GCTGCGCCGC CGCGCCGAGA AGGAAACCTC ACGCAAGAGC
GCGGTGAAGA AGCTGCGCCT GCCCGGCAAG CTCGCCGATT GCACCAACAC CGCGACAGAC
GGTTCCGAAC TGTTCATCGT CGAGGGCGAC TCGGCCGGCG GCAGCGCAAA GCAGGCGCGC
GACCGCAAGA CGCAAGCCGT GCTGCCGTTG CGCGGCAAAA TCCTCAACGT GGCATCGGCG
ACCAGGGACA AGGTGACCGC CAACGCCCAG CTCTCCGACC TGATCCAGGC GCTCGGCTGC
GGCACCGGCA CCAACTATCG CGAGGAGGAT CTGCGCTATT CGCGCGTCAT CATCATGACC
GACGCCGACG TCGACGGCGC CCACATCGCC TCGCTGCTGA TTACGTTCTT CTACCGGCAG
ATGCGGCCTC TGATCGACGA GGGGCATCTC TATCTCGCGG TGCCTCCGCT CTATCGCCTC
ACCCACGGCA GCAAGACGGT CTACGCCCGC GACGACGCCC ACAAGGACGC GCTGCTCAAG
AGCGAGTTCA ACGCCAACGC CAAGGTCGAT GTCGGCCGGT TCAAGGGCCT CGGCGAGATG
ATGCCGGCGC AGCTCAAGGA AACCACCATG GACCCGGCGA GGCGCACCAT GCTGCGCGTG
GTGCTGCTGG CGGAGGATCG CGACGGCACC GCGGATTCGG TCGAGCGTCT GATGGGCACC
AAGGCGGAGG CGCGCTTCGC CTTCATCTCC GAAAAGGCCG AATTCGCCAG CGAGGACTTG
CTGGACGTGT AA
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| Protein sequence | MSKPLKQKTK PSKDLFDASE AKGRPTARDS SRASGAEADY TAADIEVLEG LEPVRRRPGM
YIGGTDEKAL HHLFAEVIDN AMDEALAGHA TFIVVELAAD GFLTVTDNGR GIPVDPHPKF
PKKSALEVIM CTLHSGGKFD SKVYETSGGL HGVGVSVVNA LSSRLEVEVA RSQNLYKMTF
ERGHPRGSLD DLGRISNRRG TTIRFKPDTD IFGPKAAFKP QRLFKMTRSK AYLFGGVEIR
WRCAPDLLKG LDDIPAEATF HFPGGLKDYL AAAIHKDTLV HPDIFSGKSG RNGAHGACEW
AVAWTADADG FLSSYCNTVP TPDGGTHESG LRSALLRGLK DHAERVGQGK HAASVTSEDL
MVGAAAMLSV FVREPEFQGQ TKDRLATSEA SRIVEQAIKD PFDHWLSGNP VQANKLLDFV
IERADERLRR RAEKETSRKS AVKKLRLPGK LADCTNTATD GSELFIVEGD SAGGSAKQAR
DRKTQAVLPL RGKILNVASA TRDKVTANAQ LSDLIQALGC GTGTNYREED LRYSRVIIMT
DADVDGAHIA SLLITFFYRQ MRPLIDEGHL YLAVPPLYRL THGSKTVYAR DDAHKDALLK
SEFNANAKVD VGRFKGLGEM MPAQLKETTM DPARRTMLRV VLLAEDRDGT ADSVERLMGT
KAEARFAFIS EKAEFASEDL LDV
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