| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2130 |
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| Symbol | |
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| ID | 4031060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2375272 |
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| End bp | 2376963 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637970588 |
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| Product | phage integrase |
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| Protein accession | YP_577387 |
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| Protein GI | 92117658 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTACG CAAGGGTCGC CATTCCCCAA GACCTTCAAC CCCTCTATCC CACTAAGACA
GGGACCAGTA AACAGGAGCT TTGGAAGTCG CTGGGGACGC GCGATCCGAA AGAGGCCGTA
GCGAAGGCCC GCCCGGTGCT GGCGCGATGG GAAGCGGAAT TTGAGCGGCT ACGGACGCGC
CGCCAGCCGA CGCCGGCCGA TCTCAGCAAG GCCGTCTGGG ACCACTACGA GGGCGAATTG
GAGCGGGACC GACAGGAACG GACCGCCTCT GCCCGGCCAG CAAGATATCC AGGCGCCGCC
GACGAATTGA GAACCACAGC GGACGCCGCT GGCGAGGTCA CCTTAGAGGA CGCCGGGAAC
TTCCTCGTGA TTCGCAATGC CGCTCAGTGG GGCCGCGAAC AGCGGGAACC GCACCTTGAA
ACGCTTCGGC TGCATCTGGC GAGGGGTGAA ACCGCCTTGA TCGAATGGGC CGCCGACGAC
GTGATCCAGC GCGAAGGGTT AATGATTCCT AAAGACTCGT CCGTCTATCG CGACCTTTGC
CAGCGGCTAC AGCGGTCCGA AATAGAGAAG CTACAGCGAA CGCTCGAACG GAACCAAGGC
AACTTCACCG GCACGCCCGC CGATCCGATA GTCGTGCCGT CCTACCCGAC CATGGGGAAA
AAGCAGGCCG CGTCCGGCGA GACGCTGGCG GAACTCTACG CCCGCTATCA GGCGGAACAG
AACGGTCGCG TCACGCAAGA CACGTGGAAT CAGAACGCCG GGATTGTGCC GCTGTTTTTC
GAGTTTATCG GAGAGACTTT GCATATCAGC GCGATTACGC GGAAGGCTGT CCGGGACTGG
AAACACGCCC TCGCCTCTTG GCCCCGCAAA GCGACCAGCA TCAAGCAATT CGAGGGCATG
TCGTTCCGCA AGGTGATCGA GGCTAACAAG ACGGTCGGAA AACCGGTCAT CAGCGCCAGA
ACGACGAACA GATATATCAG CGCCATCGCC CCGTTCTGCC AATGGCTATT CGATGCCGAA
TATATCGAGC AGGACGCCTG CCAGCGGATG CACCTTGCCG TCGATAAGAA AAAACGGACG
GTCTATCCGT GGTCCGGTGA CGAATTGAAA CTGATCTTTA CATCGCCGCT CTTTGGGAAG
TGCCGGGGCG AGCGGCAAGA ACACCTACCG GGCAAGGTCG AGATTCGGGA TTGGCGCTAT
TGGTTGCCGT ATCTCGCAGC CTATAGCGGC GCGCGCCTTG GCGAGTTGTC GCAAATGCTG
ACCGCCGACG TTCGGCAACA CCATGGCGTC TGGATCCTCC ACATCACGCC GGAAGGGTCG
CAAGACAAGT CCGTCAAGAC GGACGGCAGC GCCCGCGTGG TGCCGCTGCA TTCGCGGCTC
ATTGAACTTG GATTCCTGGA CTATCACGCG CGTATGGTTG AGCGTGGCGA GAAACAGCTA
TTCCCGGAGT TGAAGCCGGA CACGCGCGGA CACTATTCGC GAATGCCGTC ACGTTTCTTT
GCGGGCTACT TCAAAAATAT TGGCGCTAAA GAGGACAAGA GCCGGAATTT CCATAGCTTC
CGGCATAGCG CGGCTGACGC CTTCCGGCGT GGCGGGTATA TGGACGAAAC GTTCGGCCCC
CTACTCGGTC ACACCAAAGG CAGCACGACG GGGCTTTATG GCAACGTGCC GCAAGGACCG
GCGATATCGT GA
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| Protein sequence | MYYARVAIPQ DLQPLYPTKT GTSKQELWKS LGTRDPKEAV AKARPVLARW EAEFERLRTR
RQPTPADLSK AVWDHYEGEL ERDRQERTAS ARPARYPGAA DELRTTADAA GEVTLEDAGN
FLVIRNAAQW GREQREPHLE TLRLHLARGE TALIEWAADD VIQREGLMIP KDSSVYRDLC
QRLQRSEIEK LQRTLERNQG NFTGTPADPI VVPSYPTMGK KQAASGETLA ELYARYQAEQ
NGRVTQDTWN QNAGIVPLFF EFIGETLHIS AITRKAVRDW KHALASWPRK ATSIKQFEGM
SFRKVIEANK TVGKPVISAR TTNRYISAIA PFCQWLFDAE YIEQDACQRM HLAVDKKKRT
VYPWSGDELK LIFTSPLFGK CRGERQEHLP GKVEIRDWRY WLPYLAAYSG ARLGELSQML
TADVRQHHGV WILHITPEGS QDKSVKTDGS ARVVPLHSRL IELGFLDYHA RMVERGEKQL
FPELKPDTRG HYSRMPSRFF AGYFKNIGAK EDKSRNFHSF RHSAADAFRR GGYMDETFGP
LLGHTKGSTT GLYGNVPQGP AIS
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