| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2076 |
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| Symbol | |
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| ID | 4031250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2308082 |
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| End bp | 2309824 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637970533 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_577333 |
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| Protein GI | 92117604 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.654023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAGA CCCTTCCCCG TCCCCGATTT GGACAATCGC GCGAGCCGAA GAACCCGGTG
AATCCCGGGC GAGGCCTTGC CAACGTGATC GATTTTGTTG CTTCCAGCCA CATCAGGTCG
GCGTTATTTC TGGCGATCGT CGGCCTGCTG TTCTTTCTGC CCGGCTTTTT CAATATCCCG
CCGATCGACC GCGACGAGCC TCGTTTCGCG CAGGCGACCA AGCAGATGGT CGAGACCGGC
GATTTCGTCG ACATCCGCTT TCAGAACGAG GTGCGTTACA AGAAGCCGGT CGGCATTTAC
TGGTTGCAGG CAGCCGCCGT GGAAACGGCG TCGTCGCTCG GACTCCCGCG GGCGCAAATC
CGCATCTGGC TGTATCGCGT ACCCTCCCTG ATCGGTGCGA TCGGCGCGGT GCTCCTGACC
TACTGGGCGG CGCTCGCTCT CGTGACGCGG CGCGGCGCTG TTCTGGCCGG GCTGATCATG
TGCAGTTCGG TATTACTCGG GGTGGAAGCG CGGCTCGCAA AGACCGACGC CATGCTGCTG
CTGACCGTTG TCGCGGCGAT GGGTCCGCTC GCGCGGATCT ATCTGTCGTC GCAGCGACGC
GAGAACCTGG AGCATCCCTC GTGGATACAT CCGGCCATCT TCTGGACGGC GCTCGCCGGT
GGAATTTTGC TCAAGGGTCC GCTGATCCTG ATGTTCGTTG GATTGACGAT CGGGACCGTC
GTTATTCTCG ATCGCTCTGC ATCGTGGCTA AAGGGTCTGC GGCCCGTCTG GGGGCTGATG
TGGATGCTGG TCCTCGTCAT GCCGTGGTTC GTTGCGATTT TCCTCCGCGC CGGAGATACG
TTTTTCGCGG ACTCGATCGG CGGCGACATG CTGAGCAAGC TTGCGGCTCA GGAATCACAT
GGAGCACCGC CCGGAACTTA CTTCCTGCTG TTCTGGATCA CGTTCTGGCC CGGCGCGCCG
CTGGCAGGGC TGGCGGCGCC TGCGGTCTGG CGCGCACGCC GGGAGCCGGG GGTACGGTTT
CTGCTCGCGT GGCTGGTTCC GTCTTGGATC GTGTTCGAAC TGGTATTGAC CAAACTGCCG
CACTATGTGC TGCCGCTGTG TCCGGCGATC GCGATCCTGT CGGTTTACGC GCTGGAGCGC
GGCGTGCTGT CCCGATCGTG GCTCACGAAG GGCACGGCAT GGTGGTTTGC CATTCCCGCG
ATCACCCTGG TGCTCGCGAT CATCGCGACC ATTACCCTCA CGCGCCAGCC GGTGTTTCTG
GCATGGCCGT TTGCCGCCGC GGCCCTGATC TCCGGACTGT TCGCGTGGTG GCTCTATGAC
GACCGTAATG CGGAACGTTC CTTGCTGAAT GCGGTCATGG CGGCACTGTT CCTGAGTGTT
TCCGTCTACG GGATCATTGT CGCGGCGCTG ACGCCGCTGT TCCCGAGTCC GGAAGTCGCG
CGCGCGCTGC GAAACGTGGT GTGTGTCGGG CCAAAGGTCG CTGCGGCGGG CTACCACGAG
CCAAGTCTGG TCTTTATGAC GGGGACATCG ACGCTGCTGA CGGACGGTCC CGGCGCCGCC
GATTTCCTCG GCCACGGAAG CTGCCGGTTC GCGCTCGTCG AATCGCGCTC CGAGCGGGCC
TTCGCGCAGC GCGCCGAAGC CATCGGACTA CGCTACAACG TCGCCACGCG GATTGACGGC
TATAACTTCT CGCAGGGCAA AACAATTTCG ATCGCCATCT TCCGCTCGGA GGGAACGCGT
TAG
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| Protein sequence | MAETLPRPRF GQSREPKNPV NPGRGLANVI DFVASSHIRS ALFLAIVGLL FFLPGFFNIP
PIDRDEPRFA QATKQMVETG DFVDIRFQNE VRYKKPVGIY WLQAAAVETA SSLGLPRAQI
RIWLYRVPSL IGAIGAVLLT YWAALALVTR RGAVLAGLIM CSSVLLGVEA RLAKTDAMLL
LTVVAAMGPL ARIYLSSQRR ENLEHPSWIH PAIFWTALAG GILLKGPLIL MFVGLTIGTV
VILDRSASWL KGLRPVWGLM WMLVLVMPWF VAIFLRAGDT FFADSIGGDM LSKLAAQESH
GAPPGTYFLL FWITFWPGAP LAGLAAPAVW RARREPGVRF LLAWLVPSWI VFELVLTKLP
HYVLPLCPAI AILSVYALER GVLSRSWLTK GTAWWFAIPA ITLVLAIIAT ITLTRQPVFL
AWPFAAAALI SGLFAWWLYD DRNAERSLLN AVMAALFLSV SVYGIIVAAL TPLFPSPEVA
RALRNVVCVG PKVAAAGYHE PSLVFMTGTS TLLTDGPGAA DFLGHGSCRF ALVESRSERA
FAQRAEAIGL RYNVATRIDG YNFSQGKTIS IAIFRSEGTR
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