| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2065 |
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| Symbol | |
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| ID | 4031239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2294281 |
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| End bp | 2295645 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637970522 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_577322 |
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| Protein GI | 92117593 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.309375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTTTA AACCGGGGCT GGACGAAACC GCGAAAGCAG CCGGCGACGG GATGCCTGAC
AAGGTGACGG GTCGCGGCCG GCGACCTGCC GTGCGGATCG CGATCACGCT CCTGATCGTC
GGAGGACTCG CCTATCTCGG CTGGACCGCG CTCGCGCAAA AGAAGCGCGA CGCAAGGGGC
GGACGTCCCG ATCTCGCAGT ACCGGTGCTT GCCGCAACGC CGCGCATCCA GGACGTACCG
GTCTACCTCG ATGGCGTCGG AGCCGTCCGG GCTCTGAACA CGGTCGTCGT GCGCTCGCAG
GTCGACGGCA AGCTGATCGC CGTCAATTTT ACTGAGGGGC AGGACGTCAA GAAAGACGAC
GTACTGGGCG AGATCGATCC CGTGATCTAC CAGGCGCAGT ACGATCAGGC GGTCGCGAAG
AAGGCCCAGG ATGAAGCGCA ACTGGCCAAC ATGCGCCTCG ATCTGAAGCG CTACCAGCAA
CTGGCCGCCT CCAATGCCGG ATCGAAGCAG CAGGCCGATA CGCAGAGTGC GGTCGTTGCG
CAGCAGGAGG CGCTCGTCAG GGCCGATCAG GCCGCGATCG ACAACGCCCA GGCTATGCTC
GGCTATACCA GGATTGTCGC GCCGATCTCG GGCCGTGCGG GCCTGCGCCA GGTCGATCGA
GGCAACATCA TCCATGCGTC CGATGCGACC GGACTTGTCA TCATTACGCA GCTTCAGCCC
ATCGCTGTGC AATTCAGCCT GCCGCAGCAG CAGATTACGC GTGTGAATGC AGCAATGGCG
AAGGGCGCCC TCGCAGTCGA TGTATTCGGA AATGACGGAA CGACAGTTGT CGATACCGGC
AAGCTGATCG GCGTCGACAA TCAGGTCGAT CCGACGACCG GCACGTTGAA GCTGAAGGCC
GAATTTCCGA ATGGACACTT CCAGCTCTGG CCCGGCCAGT TCGTCAACGT GCGCCTCAAG
GTGGAAACGC TGTCGCAGGC GACGGTCATA CCGACGTCAG CGGTACAGCG TGGTCCGCTC
GGAACCTTCA GCTATGTGAT CGGAAGCGAC GATATCGCGA CAGCAAAGCC CGTGACGGTG
ACGCAGCAGG ACGAAAAGGA CGCGGTGATC GCCAAGGGCA TTGCTCCCAC GGATCGGGTG
GTGACCACGG GATTTGCCAA TCTCTCCGAC GGTGCAAAGG TGACCGTCAG CCAGAACGAT
CAGACGCCGA CGGCCGATCT GGCGCCTCAG AAGCGACAAG GTAAACGCGG CGCTCGTCAA
GGCGGCGAGC GCCGCGGCAA GCGGGACGAG GGAAGTCAAA AGCAGTCGGG CAGCGGGGTG
CAGAAAAACG GGCAATCGAG CGGCAACGCA AAGACTCAAC CGTGA
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| Protein sequence | MLFKPGLDET AKAAGDGMPD KVTGRGRRPA VRIAITLLIV GGLAYLGWTA LAQKKRDARG
GRPDLAVPVL AATPRIQDVP VYLDGVGAVR ALNTVVVRSQ VDGKLIAVNF TEGQDVKKDD
VLGEIDPVIY QAQYDQAVAK KAQDEAQLAN MRLDLKRYQQ LAASNAGSKQ QADTQSAVVA
QQEALVRADQ AAIDNAQAML GYTRIVAPIS GRAGLRQVDR GNIIHASDAT GLVIITQLQP
IAVQFSLPQQ QITRVNAAMA KGALAVDVFG NDGTTVVDTG KLIGVDNQVD PTTGTLKLKA
EFPNGHFQLW PGQFVNVRLK VETLSQATVI PTSAVQRGPL GTFSYVIGSD DIATAKPVTV
TQQDEKDAVI AKGIAPTDRV VTTGFANLSD GAKVTVSQND QTPTADLAPQ KRQGKRGARQ
GGERRGKRDE GSQKQSGSGV QKNGQSSGNA KTQP
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