Gene Nham_2039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2039 
Symbol 
ID4029302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2262590 
End bp2263000 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content65% 
IMG OID637970496 
Productcupin 2, barrel 
Protein accessionYP_577297 
Protein GI92117568 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.454361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATCC ATCAAGCAGG TTCGCGACCG ACAAAAACCG CACCTCAGGA TTATTTTACC 
GGCACGGTCT TGCTGGAGCC GATCATCGCC GCCGTGAACG CGCCGTCGCG CGTCCTCGCC
GCGAGCGTCG CGTTCGAGCC TGGCGCACGG ACCGCATGGC ACACCCATCC GCTCGGCCAG
ACGCTATACG TCGTGTCCGG CGTTGGGCTG GTCCAAGCCG AGGGGGGGCC TATCCGCGAG
ATACGCCCCG GTGACACGGT ATGGTTTCCC CCGGGAGAAA AGCACTGGCA CGGCGCGGCG
CCGACCACCG CCATGACCCA CATCGCGGTG CACGAATCCC TCGACGGAAG CGCCGTCACC
TGGATGGAAC AGGTCACCGA CGAGCAATAT GGCGGTCAAG TCGGCGGTTG A
 
Protein sequence
MDIHQAGSRP TKTAPQDYFT GTVLLEPIIA AVNAPSRVLA ASVAFEPGAR TAWHTHPLGQ 
TLYVVSGVGL VQAEGGPIRE IRPGDTVWFP PGEKHWHGAA PTTAMTHIAV HESLDGSAVT
WMEQVTDEQY GGQVGG