| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2008 |
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| Symbol | |
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| ID | 4031561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2233818 |
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| End bp | 2235797 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637970465 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_577267 |
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| Protein GI | 92117538 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0838931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGGCTC CCGCTAAGAA GAAACCGGCC AAAAAGTCCC GTGCAAGCAA GGCACGCAAA
TCGCGCCACG CCGCCACCGA TCGCGCCTCT ATTGTGAAGA AGCGCAGCAA GAAGGCGAGC
GCCCGAAAGA CCGGCAAACG CACAAAAAAG ACGAGCACGA AGACGACGAC AAAAGCGCGC
GCCCCGAAGA AGACCAAAAA GACAACAAAA GCGCGCGTAC CGAAGAAAGC CAAAAAGACA
GTAAAGAAGG CGGCGAAGCG AGCGGCCAAA AAACAGCCAG CTACAAAAAA AATTCCGAAA
AAAGCGGCGA CGAACAAGGT CACTGCGAAA AAGGCTGCGC CGAAGCGATC CGCAGCAAAG
CGTCCGGCGA AGTCCGCAAC GTCACGTCGG CCCGGCACGA CCGCGCCGCC GACGCCTTCG
AGCGTCACGC CGGCCCGCAC CAACACTTTC TACATCACGA CGGCGATCGT TTATCCGAAC
GGCGCACCGC ATATCGGGCA CGCCTATGAG GCGATTGCCA CGGACGTGCT GGCGCGCTTC
CAGCGACTCG ACGGCAAGGA CGTGTTCTTT CTGACCGGCA CCGACGAGCA CGGCCAGAAG
ATGGTGCAGA CCGCGCAGAA GGAAAATATA TCCGCGCTTG AACTCGCTAC GCGAAACGCC
GAGCTACTGC GGAAGCTCGA TGAGACGCTG AACATTTCGT TCAACCGGTT CATCCGCACC
TCGGAACCCG CACATCACCA TTCGGTCCAG GAAATTTGGA AACGCATGGC GGCGAATGGC
GACATCTACC TGTCGAGTTA CGCCGGCTGG TATTCGGTGC GCGACGAAGC CTATTACGCG
GAGGACGAGA CCGTCGTTGG CGAGGACAAC GTGCGACGTG GCCCGCAGGG CACGCCGGTA
GAGTGGGTCG AGGAGAAGAG CTATTTCTTC AAACTGTCGG CCTATCAGGA CAGGCTGCTC
GCGCTGTACG AAAGCCAGCC GGACTTCATA GGCCCGGATT CCCGCCGCAA TGAAGTCATC
AGTTTTGTGA AGGGCGGCCT CAAGGATCTG TCGATCTCGC GCACCACCTT CGACTGGGGC
GTCAAGGTGC CCGACGATCC CGAGCACGTC ATGTACGTCT GGGTCGATGC GCTGACCAAC
TACATCACCG GTGTCGGTTT TCCGGACGAA AACGACAAGG ACTGGCGCTA CTGGCCGGCC
GACCTCCACA TCATCGGCAA GGACATCATT CGCTTTCACG CCGTTTACTG GCCGGCCTTC
CTGATGTCGG CGGGCATCCC GTTGCAGAAG CGGGTCTATG CTCACGGCTT CCTGTTCAAC
CGCGGCGAGA AGATGTCGAA GTCGGTCGGC AACGTCGTCG ATCCCTTCAA CCTCGCCGCG
CAATACGGCG TCGATCAGGT GCGCTACTTC TTCCTGCGCG AGGTGCCGTT CGGGCAGGAC
GGCAGCTACA ACCACGAGGC TATCGTGGCG CGCATCAATG CCGACCTCGC CAACGACTTC
GGCAACCTTG CGCAGCGCTC GCTGTCGATG ATCGCCAAGC AACACGACGG CGCACTACCG
GAGCCCGGTG ACTTCAGCGA CAACGACAAA GCCATCCTCG CGCAGGCGGA CGGTATGATC
GCGGTCGCGC GCGAGGCGAT GAATACGCAG CAGATTCATC AGGCGCTCAA TGCGGTCTGG
GCCGTCGTCG CCGAAGCCAA CCGCTATTTT GCGGGCGAAG CGCCTTGGGT CCTGGCCAAG
ACCGATCCGG CGCGGCAGAA GACGGTGCTG TATGTCGCCG CTGAAGTGGT ACGCCAGATC
GCGATCCTGG CACAGCCCGC GATGCCTGCG TCATGCGCGA CGATGCTCGA CCTCCTCGGC
ATTCCCGCCT CTGAGCGAAA TTTCGCGATG CTTGGCGGTC ACGTCCGCAT CAAGCCGGGC
ACGACGTTGC CGCCACCCGT CCCCGTGTTC CCGCGCTATG TCGAACCGTC CGTGGCCTGA
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| Protein sequence | MVAPAKKKPA KKSRASKARK SRHAATDRAS IVKKRSKKAS ARKTGKRTKK TSTKTTTKAR
APKKTKKTTK ARVPKKAKKT VKKAAKRAAK KQPATKKIPK KAATNKVTAK KAAPKRSAAK
RPAKSATSRR PGTTAPPTPS SVTPARTNTF YITTAIVYPN GAPHIGHAYE AIATDVLARF
QRLDGKDVFF LTGTDEHGQK MVQTAQKENI SALELATRNA ELLRKLDETL NISFNRFIRT
SEPAHHHSVQ EIWKRMAANG DIYLSSYAGW YSVRDEAYYA EDETVVGEDN VRRGPQGTPV
EWVEEKSYFF KLSAYQDRLL ALYESQPDFI GPDSRRNEVI SFVKGGLKDL SISRTTFDWG
VKVPDDPEHV MYVWVDALTN YITGVGFPDE NDKDWRYWPA DLHIIGKDII RFHAVYWPAF
LMSAGIPLQK RVYAHGFLFN RGEKMSKSVG NVVDPFNLAA QYGVDQVRYF FLREVPFGQD
GSYNHEAIVA RINADLANDF GNLAQRSLSM IAKQHDGALP EPGDFSDNDK AILAQADGMI
AVAREAMNTQ QIHQALNAVW AVVAEANRYF AGEAPWVLAK TDPARQKTVL YVAAEVVRQI
AILAQPAMPA SCATMLDLLG IPASERNFAM LGGHVRIKPG TTLPPPVPVF PRYVEPSVA
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