Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1886 |
Symbol | |
ID | 4029590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 2097710 |
End bp | 2099164 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637970354 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_577156 |
Protein GI | 92117427 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCGGC ATTCGCTCAG ACTGCGACTC GTCGCCGGCG GTCTCATGGC GATCCTGATC GCGCTTGCGA TTGCCGGTGG CGCGCTCATC GTTCTCTTCG AGCGTCATGT TTCACGCACC CTGGCTCAAG ATCTCGACGT TCATCTGAAG CAGCTTCTCG CGGGCATCGA CGTCGACCCG CAAGGCAAGC TGGTGCTGAT GCCGACGCCG GTCGATCCAC GCTTCGCCGA GCCTCTCTCC GGACTTTACT GGCAGGTCGG CGATGACCGC GGGCAGCTTC TGCGCTCGCG CTCGCTCTGG GATTCCACCA TGGAACTCCC GGCGGATCGG CTGAGCCCTG GCGAAACGCA CCAGCACCAA GCGTCGGGAC CTGGGGACCA GCGTGTGCTG GTCGCCGAGC GCGCCATCAC GCTTTCCGCA GATGGGAAGC CGGTAATCGT TCGCTTTGCG GTCGCCGAGA ACCTGGCGAG GGTGTCGGCG GCGACCTCGG CTTTCGCCAA AGATCTCGCG CTCGCGCTCG TGCTTCTCGG CTGCGTGCTG GCTCTTGCGA CATGGGTCCA GGTGGGCGTC GGCTTGCATC CACTGGTCAC TCTGCGCCGC GGCGTGGCCG ACATCAGAGC AGGGCGGATC CGGCATCTGC CGTCCTCGGT CCCGACCGAA GTTCGTCCCC TCGTAGAGGA AGTCAATGCA TTCATTGATG CGCAGAAGAG GGAGATCGAA CGGTCCCGCG GCCGCGCCGC CGATCTGGCC CACGGACTGA AAACGCCACT TGCGGCTCTC GCAGCGGATG CGTCGCGACT CCGTGATCGG GGTGAGCCCG CCATCGCCCG AGACATCGAA GCCGTCGGGG AAGCCATGGG CCGCCACGTC GACCGCGAGC TCGCGCGAGC CAGGGTTCGC GGGCGAACTC GTGGCGTCCC CGCAGCGTCC ACATCGGTGA AACCGCTCGT GGAATCCATC GTCGCGACCG TGTCGCGCAC TCCCGACGGC GCGCGAGTGA GGTTCGAGAA CCTCATCGCC GACCATCTTT GCGTCCCGCT CGACCGGACT GATCTTGCGG AGGTTCTGGG TAATCTGATC GAGAACGCGG CCCGGCATGC CGGAAGATCG GTCCGCATCA CCGACGGAAG CCAATTATCC CTTGTCGTCG AAGACGACGG CGAAGGCATC GAACCGAGTC ACCTGTCACG CGTGCTCGCA CGCGGTGCCC GTCTCGACGA GCGAGGCAGT GGCGCGGGTC TGGGGCTTGC CATCGTGCAG GATGTCCTGG ATGCGTACGG GTGGCGGCTG GAGCTCTCCA GGTCGGAGCT CGGCGGCCTG AAGGCGGTAA TCGCTCCGAT GTCCGAAAGC GACCCGTTAT CGTCGCAGAA CGAAAGGGGG ATCGTTAACC TCGGAAGCGA TCCCGCCCAT TCAGAGTTAG AATATCCCAT CCAGAGGGAT AGGATAGGTA CATGA
|
Protein sequence | MNRHSLRLRL VAGGLMAILI ALAIAGGALI VLFERHVSRT LAQDLDVHLK QLLAGIDVDP QGKLVLMPTP VDPRFAEPLS GLYWQVGDDR GQLLRSRSLW DSTMELPADR LSPGETHQHQ ASGPGDQRVL VAERAITLSA DGKPVIVRFA VAENLARVSA ATSAFAKDLA LALVLLGCVL ALATWVQVGV GLHPLVTLRR GVADIRAGRI RHLPSSVPTE VRPLVEEVNA FIDAQKREIE RSRGRAADLA HGLKTPLAAL AADASRLRDR GEPAIARDIE AVGEAMGRHV DRELARARVR GRTRGVPAAS TSVKPLVESI VATVSRTPDG ARVRFENLIA DHLCVPLDRT DLAEVLGNLI ENAARHAGRS VRITDGSQLS LVVEDDGEGI EPSHLSRVLA RGARLDERGS GAGLGLAIVQ DVLDAYGWRL ELSRSELGGL KAVIAPMSES DPLSSQNERG IVNLGSDPAH SELEYPIQRD RIGT
|
| |