Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1726 |
Symbol | |
ID | 4030345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1924990 |
End bp | 1926612 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637970198 |
Product | phage terminase |
Protein accession | YP_577002 |
Protein GI | 92117273 |
COG category | [R] General function prediction only |
COG ID | [COG4626] Phage terminase-like protein, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.18547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGGATC CATACCCGCA TTGGCTATTT GACGACTCGC CGATCGATGA TCCGTTTGGA TACGGCGAGC GCGCGGTTAA GTTTCTGCGC CGGCTTAAGC ATCCAAAGAG TCGCTTGCCG GGCAATGCAT TCCAGCTTGA TCCATGGCAA GAGCGTATCG TGCGCCGCAT TTACGGACCG CGCAATCCTG ATGGCTCGCG CGTCGTTAAA ACAGTGGTCC TGCTAATCCC TAGAGGCAAT CGCAAAAGCA GCCTGTCGGC CGCGATTTCG CTGCTTCACG CCATCGGCCC GGAGAAAATC CCCGGCGGTG AATGCGTGCT GGCCGCCGCA GATCGTAAGC AAGCCTCGAT CGCCTTCAAA GAGGCCGTCG ACGTCGTGCG GATGGATAAG CGGCTTGTAT CGGCCACGCG CATCTATGAC GCCTTCAATT CAGCGAAGAA AATCGTCCTG AAAAAGGGCG GCAGCTTTAT CGAAACCATT AGCAGCGATG CCGGCACGGC TCACGGAAAG AGCATTGCGC TGCTTGTGGC AGACGAACTG GCACAGTGGC GAGGCACTGA CCTTTGGATT GCGCTGAAGT CGTCGTTGCC GAAGGTGAAG GACTCGCTGT TGGTGGTTGC GACGACTTCC GGCCGCGGCC AGGACAATCT CGCGTGGGAG ATCGTCGACC GTGCGCGCAA GGTTGCGACG GGCGAGATCA ATGACCCTTC CATGTTGCCG ATCCTGTTCG AGACCGACGC GGGCGCGGAT TGGAAAGACG AGGCGCTGCT TTATCGCGCC AACCCCGGCC TGACATTGGG ATATCAAGAC ATCTCCGGCT TGCGACAGCT TGTGCGGGAA GCTGAAACCA GCATGACGGC TAGGGACATG GTGCAGAATC TCCACCTCAA TGTCTGGCTT GATAGTTCCG CGGCACCGTT CGTCGATATG ACGGTCTACG ACGAAGGCGC CGGCGAAATA GACCTTGCAG CGCTTGAAGG CGAGCCTTGC TGGCTGGGCG TCGACCTTAG CTCTAGCATC GACCTCTCGG TCATTGTCGC GGCCTTCCGT GATGGCGATG ATGGTTACAT CGTGGTGCCT TACTTCTTTT GCCCGGCCGA CAACTTGCGA CAGAGGCAGG AAGCTACAGG CGCTCCATAC ATCGACTGGC AAGCCCGCGG GCTGATCGAG GCCACGCCTG GCAACGTCAT CGATTTTCGC CGCGTTGAGG AACGCGTTCG CGAACTGTGC GAGACCTATT CTGTGCAGGA GATCGCGGTC GATCCGGCCA TGGCGCGAAA CCTAATGAAC AACCTTTTAG AGGATGGACT CCCGGCCGTC GAACACCGGC AAGGTTCGTT GTCGATGATG CCAGCTATAG CGAACCTTGA GCGCGCCATC GTTGGGCGCA AGTTCAAGCA TGGCGGCAAT GAGCCGTTGC GGTTCTGCTT TGCGAACGTC GAGGCGCAGA CGAATTCGTC TGGCCATGTC GTGCGGTTCA CCAAATCAAA GAAGTGGTTA TCGATCGATG GAGCCGTCGC GGCGGCCATG GCGGCGCATC GGGCGAGCGC TGGCGGCAGT GCGGCGGCGA CGTCGCTGTA CGATGACCCG GAATGGGAAA CGGCGCTGGC GGGGTTTAAT TAG
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Protein sequence | MKDPYPHWLF DDSPIDDPFG YGERAVKFLR RLKHPKSRLP GNAFQLDPWQ ERIVRRIYGP RNPDGSRVVK TVVLLIPRGN RKSSLSAAIS LLHAIGPEKI PGGECVLAAA DRKQASIAFK EAVDVVRMDK RLVSATRIYD AFNSAKKIVL KKGGSFIETI SSDAGTAHGK SIALLVADEL AQWRGTDLWI ALKSSLPKVK DSLLVVATTS GRGQDNLAWE IVDRARKVAT GEINDPSMLP ILFETDAGAD WKDEALLYRA NPGLTLGYQD ISGLRQLVRE AETSMTARDM VQNLHLNVWL DSSAAPFVDM TVYDEGAGEI DLAALEGEPC WLGVDLSSSI DLSVIVAAFR DGDDGYIVVP YFFCPADNLR QRQEATGAPY IDWQARGLIE ATPGNVIDFR RVEERVRELC ETYSVQEIAV DPAMARNLMN NLLEDGLPAV EHRQGSLSMM PAIANLERAI VGRKFKHGGN EPLRFCFANV EAQTNSSGHV VRFTKSKKWL SIDGAVAAAM AAHRASAGGS AAATSLYDDP EWETALAGFN
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