Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1206 |
Symbol | |
ID | 4032297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1361321 |
End bp | 1362661 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637969686 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_576495 |
Protein GI | 92116766 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCCC ATGCATCTCG TCGCTATGGC CTATCGCGCC GCGACGTCAT CAAGACCGCT GTGGGTGCGG CCGCCACCGT CGGCCCATTC TTCCATGTTG CGCCGGCTCG TGCGGCCAAG ACGCTGAAGA TCCTGCAGTG GAGCCACTTC GTCCCCGGCT ACGACAAGTG GTTCAACAAC ACCTACATCA AGGAATGGGG CGCCCAGCAT GGCACCGAAG TGGTCGTCGA CAACATCAAC CTCGGCCTGA TCCCTTCGCG TGCGGCAGCG GAAGTATCGG CGCAGAAGGG GCATGACCTC GTGATGTTCC TCGCCCCGCC TTCGGTTTAC GAAGAGCAGG TCGTCGACAT GAAGGATGTC TACGACGCGT GCGAGAAAAA GTACGGCAAG CCGATCGATC TCGCCGTAAA GAGTACCTAC AACCCCAAGA CCCGGAAGTA CTTCGCGTTC TCCGACAGCT TCGTCCCCGA TCCTGTCAAC TACCGCTCGG ATCTTTGGGG CGACGTCGGC ATGAAGCCCG ATAGCTGGGA CAATGTCCGC ATCGGCGGCA AGAAGATCAA GGACAAGACC GGAATCCCGG TCGGCATCGG CCTCTCCGCC GAGCTCGACA CCGCGATGGC AATGCGCGCG ATCATGTATT CATTCGGCGC GCACGAGCAG GACGTCGATG GCAATCTCGC GATCAATTCC AAGGAAACCC TCGAAGCCCT CAAATTCGTC AAAGCGCTGT TCGAGGAAAC GGAAACGCCC GAAGTTTTCG CGTGGGATCC GTCGTCGAAC AATCGGCAGA TGCTCGCCGG CAGGTCATCT CTGGTGCTGA ACGCGATTTC GGTCACGCGC ACGGGCGAAA ACGACAAGAT GCCGATCCAC GAGAAGATTG CGCTCGCCAA GCCGCCGAAA GGCTCGGTTC GGCAGATCGG CCTTGAGCAC GTGATGGATT GCTACGTGAT CTGGAAATTC TCCGAAAACA TTGACGGCGC AAAAATGTTC CTGGTCGACT ACATCGACAA CTTCAAGCAG GGCTTCATGG CCAGCGAGTA TTACAACTTC CCCTGCTTCT CGAAGACCGT TCCCGACCTG GCACAGATCA TCTCCAGGGA TTCCAAGGCC GTGCCGCCGG ACAAGTACGC GGTGCTTTCG GACGTGCTCG ATTGGGCAAC TAACGTCGGC TATCCCGGCT ACTCCAACGC CGCGATCGAC GAAACTTTCA ACACCTGGGC GATCAATACC ATGTTCGCAG AAGCTGCCGC GGGCGCCGAA ACTCCGGAGA ACGCTCTCAA GCGGGCGGAA GCCAAGATGA AGGCGATCTG GGCCAAATGG AAAGATCGAA AGATGATTTG A
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Protein sequence | MASHASRRYG LSRRDVIKTA VGAAATVGPF FHVAPARAAK TLKILQWSHF VPGYDKWFNN TYIKEWGAQH GTEVVVDNIN LGLIPSRAAA EVSAQKGHDL VMFLAPPSVY EEQVVDMKDV YDACEKKYGK PIDLAVKSTY NPKTRKYFAF SDSFVPDPVN YRSDLWGDVG MKPDSWDNVR IGGKKIKDKT GIPVGIGLSA ELDTAMAMRA IMYSFGAHEQ DVDGNLAINS KETLEALKFV KALFEETETP EVFAWDPSSN NRQMLAGRSS LVLNAISVTR TGENDKMPIH EKIALAKPPK GSVRQIGLEH VMDCYVIWKF SENIDGAKMF LVDYIDNFKQ GFMASEYYNF PCFSKTVPDL AQIISRDSKA VPPDKYAVLS DVLDWATNVG YPGYSNAAID ETFNTWAINT MFAEAAAGAE TPENALKRAE AKMKAIWAKW KDRKMI
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