| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1184 |
|---|
| Symbol | |
|---|
| ID | 4032642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 1340955 |
|---|
| End bp | 1342436 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637969672 |
|---|
| Product | Phage uncharacterized protein-like |
|---|
| Protein accession | YP_576481 |
|---|
| Protein GI | 92116752 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5410] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01630] phage uncharacterized protein (putative large terminase), C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACCCT CGCCCGACAA AATGTACGCA GAACTCCTGC GCCACGACCT TTGTGCCTTT
ATCCACCGAT CGTTTTTGCA ATTAAACTCT TCGACCAGAT TTCTATCAAA CTGGCATATC
GAAGTGATGG CGGCAAAGCT AGAAGACGTC AGACGGGGCG CGTGCAAGCG TCTTATCATC
AATATCCCGC CACGCCACCT TAAATCCCAT GCAACATCCA TTGCCTTTTC AGCGTGGCTG
TTGGGGCATG ATCCGTCTAA GAGGATTTTG ATCGTCACGT ATGCGCAAGA CTTCTCGGAC
AAACTTGCCC GGGATTCAAG AGAGTTGATG CGAAGTTCAT TTTATCAGGC TCTGTTTGAC
ACCAGACCTT CGAGCGAGGC GATTGCCGAG TACGAAACAA CGGTTGGCGG GTATCGACTA
TCCGCGTCGA TCGGCGGCGG CATAACAGGT CGCGGCGCTG ACATCATCAT TATCGATGAC
CCCCTCAAGG CCGATGATGC GCTGTCGGAT AATCGGCGAG GTTCTGTAAA CGAGTGGTAC
GACAACACGC TTCGTAGCCG CCTTAATAGT CAGGAGGACG GAGCGATCAT TATTGTCATG
CAGCGCCTGC ATGTTGATGA CCTGGTTGGC CATGTCACGG CGCATGAAAC CTGGGACGTT
CTCTCAATTC CTGCCATTGC AGAACGTGAT GAAATTTACG AATTTCGTAC ACCGTATGGT
GTCCGGCGCT TTCTCCGAAA CGATGGCGAC ACGCTGCAAC CCGATCTCGT GTCACGGGAC
AAACTAGAAC TGCTACGTCG CGGAATGACC GAGTATAACT TCGCCGCACA ATTTCAACAG
AATCCAGAGC CGCCGTCTGG AAATATCGTC AAGCGCGAAT GGCTTAAATT TTATGAACCG
CCTGAAAGGC CGCAGAAATT CGAGCAGGTG GTTCAAAGTT GGGACACCGC AAACAAGGAT
ACCGAGCTTG CCAACTATAG CGTCTGTACG ACCTGGGGCC TAAAAGATCG CCGCCTGTAT
CTGCTCGACG TGTCTCGCCG AAAACTCGAC TTTCCGAGCC TTAAACGAGC AGTCAAAAAT
CAGATATCGC TGCATTCGCC GAGTATCGTA CTCATTGAAG ACAAAGCCTC GGGGACATCG
TTGATCCAGG AGTTACGATC AGAAGGACTT TCTAAGGTTC AAGCAGCTCC GGCCATTGAC
GGCGATAAAA TCATGCGATT GCGAGCGCAG ACAGCGAAGA TCGAAGGCGG CTTCGTTCTC
TTGCCAAAAG AAGCGTCCTG GCTCAATGCT TACATCCTCG AGCTGATTTC CTTTCCAAAC
TCCAGACATG ATGATCAGGT CGATTCGACC GTGTTTGCGC TCGCTTGGCT CGGGCTGAAT
CAATCGAGTT ACGGTTGGAC TAAAGAAGGG CTGGAGGCAT TAGGAAGAAT CAGCGGCCTC
ACGCCATATG ATCAGCTGAT GCGAAGACTT GGACGGCTAT GA
|
|---|
| Protein sequence | MAPSPDKMYA ELLRHDLCAF IHRSFLQLNS STRFLSNWHI EVMAAKLEDV RRGACKRLII
NIPPRHLKSH ATSIAFSAWL LGHDPSKRIL IVTYAQDFSD KLARDSRELM RSSFYQALFD
TRPSSEAIAE YETTVGGYRL SASIGGGITG RGADIIIIDD PLKADDALSD NRRGSVNEWY
DNTLRSRLNS QEDGAIIIVM QRLHVDDLVG HVTAHETWDV LSIPAIAERD EIYEFRTPYG
VRRFLRNDGD TLQPDLVSRD KLELLRRGMT EYNFAAQFQQ NPEPPSGNIV KREWLKFYEP
PERPQKFEQV VQSWDTANKD TELANYSVCT TWGLKDRRLY LLDVSRRKLD FPSLKRAVKN
QISLHSPSIV LIEDKASGTS LIQELRSEGL SKVQAAPAID GDKIMRLRAQ TAKIEGGFVL
LPKEASWLNA YILELISFPN SRHDDQVDST VFALAWLGLN QSSYGWTKEG LEALGRISGL
TPYDQLMRRL GRL
|
|---|
| |