| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1063 |
|---|
| Symbol | |
|---|
| ID | 4031630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 1193792 |
|---|
| End bp | 1196248 |
|---|
| Gene Length | 2457 bp |
|---|
| Protein Length | 818 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637969561 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_576371 |
|---|
| Protein GI | 92116642 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCTCG GCACCGTCAG TGACACCCAG GCACGCGTCG GATTTTACTC GCATGTCATG
GTCGAGCGCA TGGCCGCGCA AGCGCTGAAC GCTCAGGACT TCCTTGCGGC GTTCAAGTAC
GCTGATAGAC GTTGCCGGGT CGGGCCGCCA TCGGCTGCAC ATTGCTTGGT TCTCCGCGCG
GAAGCGAACT GGAGGCTGGA ACGCAAGGAG GCGGCCCTGG CCGACCTCGC TGAAGCGCTT
CTCGTCGACC CATCCGATCT TGCCGCCAAC CGTCGAATGC TCGCCTGGGC TAACGACGAT
CGACGGCGCA CCGCGGCTGC CAGTCTGATC GGCCGTGACA GCAATCCGAC GATCCTGCGC
GTTGCCATCG AGGAGCTCTG GCGTGCAGGG GATCGGCACT GGGCCGCCTG TTCGGTGTTT
GACAATCATG TGACGGGCTG GATCGCCTGG ACCAGGGCAA ACACGGTCGC AGTCAGCCTG
GCAGTTGAAA ACGGCACGCT CACCAGCGTT CTTGAACCCA ATTCGTTTCA TCCGCTAGCC
AGCATGGAGG TTCAGGCGAC GGCCTTTCTG GTTCGGCGCC CGCCATCGAG AGCGCCGCAA
ACGCTGACGC TGACATACAA CGGCGAGATC ATTCAGGTTC GACGGCTGGC TCCCAACCTG
TCCACTCCAC CGGACATCCG AACCGAAGCG TGCCGCTCAA ACACGCCACG ACACGACACC
TCGGAACCCA CCGTTATCGT TCCGGTGTAC CGGGACGTAC AGGCAACGCT CGACTGCTTT
GTCAGCCTCA TCAAGGCGCG CGCGTCGAGT GCGACCGGAC AACACCCCTT CCGCATTCTG
GCGGTTGATG ATGCCACCCC CGAACCGGAG TTGCGGCGCT ATCTGAACGA GCTTGCTGCC
GACGGGGCGA TCGATTGTCT CGTGAACGAG ACCAATCTCG GCTTCGTCGG CGCGGTCAAT
CGCGCGCTGG AGAGCGTACC GGTTGGCGAC GTCGTGCTGC TTAATTCCGA CACCATTGTG
CCGCCGAGCT TCGTTGAGCG ATTGGCGGCC GTGGCGCATT CCGCACCGGA CATCGGGACG
GTCACCCCGC TGTCAAACAA CGGCGACATC TTTTCATTTC CGACGCCGAA CGATCTCAAT
CCGATGCAAG GCTACGAGAG TATTCTCGAA ATCGACCGGG TCGCGAGCAT CGCCAATGCC
GGTGAGGTCA TCGACGTGCC GAGCGGCATC GGCTTCTGTC TTTATATTAC GCGCGACTGT
CTCGCTGCCA TTGGCGGACT CTCGGAAAAT TTTGAGCGAG GCTATCTCGA GGATGTCGAT
CTTTGCCTGC GCGCCCGCGC CAGGGGTTTT CGCAACGTCT GCGCGCCGTC GGTCTATGTC
GGGCATCACG GCTCGAAATC CTTCCGGCAC GAGAAGCGAA GTTTGGTGCT TCGCAATCTG
GAGGTTCTGG ACCGGCGATT CCCCGGCTAC CGACGGGAAT GTCGCGCGTT CGAGATCGCG
GATCCGTTAC GACCGGCGCG TGCGAGGCTC GATCGCGCGC TGACCTGGCC CTCCGAGCCT
TCGGTGCTGA TTCTCGGCAA CCGACGGGGA TTCGCCGCCG TCGCCGAGGA GCGGGCGCGC
CATCTCCGTC AGCGTGGCGA GCGCGCGGTC CTCCTGTTGC GGGAACGCGA CGTCGTTGAT
CTCAGGGTCG CCGACGGCAG CAGCCCACAA GCCGTCCGGT TGAGCTTCGG CAGCGAGGCG
GCCATTGCCG AGGCTGCCGA TATCATCGCA CGGCTGCGTC CCGGCCGTGT CGAGATCGTC
GAGCCAAATC CGTTGCCGCG GTTGATCGAG TTGATACGGA AACTTGGCCT TCCCATCCAT
CCGTGGCTGA CGGCAGGCGA TCTTGGCGAA GCGGTCACCT CGCTTCCTGA CGAGACGCCG
CTTCTTGCTC CCGGCAAGAC CGCCAAGGCG TTTGCGGAGG CTCGCTGGCC CAACCGCAAA
ATCGTGCTCC AGGATTGGCC AACCCGCCCG CTGACGCTGA CGCCGATCCG TGGCGCGAGC
CAATCGCTGG CCATCGTACC ATCTGCGCCC TCGCCCGCGT CCTTCCGCTT GATGCGACGA
TTGGCAGAGC GTCTGCAGCA GCGAGGGCCA TCCAGATCGA TCGTCATCGC CGGCGCGACC
TGTGACGATG ATCGTCTGAT GTCTTACGCG AACGTTTTCA TAACGGGCGC GGTCGCAGCC
GACGAGATCG GCGATGTCCT GGTGCCGCAT AATCCAGGTT GGCTGCTCAC GGACTTCGAG
GAACCGGCGT TCGGACATCC TCTCATCGAG ACCGCAAGAC GGGCCTCGAT ACCGGTGGCA
TACCGCGACT GGTCCGCCGG ATCGGCCAAA CCGCGCAAGG GTGATCTTGC CATCCCAGCG
GACGCGGACG ACCAGGAACT TGTCGATGCC GTTCTCGCGT GGGTCGGGCT ATCCTGA
|
|---|
| Protein sequence | MVLGTVSDTQ ARVGFYSHVM VERMAAQALN AQDFLAAFKY ADRRCRVGPP SAAHCLVLRA
EANWRLERKE AALADLAEAL LVDPSDLAAN RRMLAWANDD RRRTAAASLI GRDSNPTILR
VAIEELWRAG DRHWAACSVF DNHVTGWIAW TRANTVAVSL AVENGTLTSV LEPNSFHPLA
SMEVQATAFL VRRPPSRAPQ TLTLTYNGEI IQVRRLAPNL STPPDIRTEA CRSNTPRHDT
SEPTVIVPVY RDVQATLDCF VSLIKARASS ATGQHPFRIL AVDDATPEPE LRRYLNELAA
DGAIDCLVNE TNLGFVGAVN RALESVPVGD VVLLNSDTIV PPSFVERLAA VAHSAPDIGT
VTPLSNNGDI FSFPTPNDLN PMQGYESILE IDRVASIANA GEVIDVPSGI GFCLYITRDC
LAAIGGLSEN FERGYLEDVD LCLRARARGF RNVCAPSVYV GHHGSKSFRH EKRSLVLRNL
EVLDRRFPGY RRECRAFEIA DPLRPARARL DRALTWPSEP SVLILGNRRG FAAVAEERAR
HLRQRGERAV LLLRERDVVD LRVADGSSPQ AVRLSFGSEA AIAEAADIIA RLRPGRVEIV
EPNPLPRLIE LIRKLGLPIH PWLTAGDLGE AVTSLPDETP LLAPGKTAKA FAEARWPNRK
IVLQDWPTRP LTLTPIRGAS QSLAIVPSAP SPASFRLMRR LAERLQQRGP SRSIVIAGAT
CDDDRLMSYA NVFITGAVAA DEIGDVLVPH NPGWLLTDFE EPAFGHPLIE TARRASIPVA
YRDWSAGSAK PRKGDLAIPA DADDQELVDA VLAWVGLS
|
|---|
| |