Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0896 |
Symbol | |
ID | 4031388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 989800 |
End bp | 991449 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637969408 |
Product | hypothetical protein |
Protein accession | YP_576218 |
Protein GI | 92116489 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGGCCG CAACCCATCT CTACCGACGA AAAGCCGTGT ACTACTGGCG TCGACGTCTT CCGAATGCGC TCGCCAGCTG GTTTCATAAA CGCCATCTGT TCCTGAGCTT GCAAACACCC GATCCCAATT TCGCGCGGCG TCTGGTGGTT CTGCTCGATG CAAAATTGGA GGAGGTCGTG ACGGCCTTCG AGCATGCTGA GATGCATCTA ACTCCGGCGC GAGTAGACGG CTTGCTGCGC GACGTTGTGA CAAAGCATTT GAACAAGCTG GAGCGATTGT CCGCGGCGGC GAAATCGTTT CCAAATTTCG ACGCTGCTCA AGCCGAGCGC GACGACCGCC GCGCCGCTTG GGCCTATCGC TTGCTCCATG CGCAAGGACC GGGCGCCGTC GTTCGTCCGA CCGACGAGAC CGAAATGTCA GCGGACGGCA TGACCGCTGC TGACATTGCT GCGGTCCAAG ACCACTTGGC GATGCTGCGC ATCAATGACC TCGTGCCCAC GCGGCACGGA ATCCTACAAA ATTTGCTCGT CGCCAACGGT GCGCCTGCCA ACGCGATGAA CTTGGCGACA GCACAAGATG TGTATTTTCG CGGAATGTGG ATGGCGCTTG CGCAGTCCGA ACGACGCTAC GGCGGCAAAA TCGTCGAAGC TGGTGATTTC GTCGACCAAA TTCTTAAGGA CAGAGTTCGA TCCGTGCCTC GAGAGTTTGA GACGCCTGTC GAGCGCATGC AGCCACGAGC GCCTGTACCA TATCCGGTCG ACGACAATCC GGTGCAGGAA GATCTGGATG CCGTCGACGA CCGTTTCAAA ACTATGGCCG ATTTACTCTT GCGGAAGCGC AGCAAGGCAG AGCGTTGGAC CACGAAAAGC AAGCAACAGG CCACACAGAC ATTTACGTTG TTGGCGAAAT TTATGAAGGA GGAACGCGCA CTCGAAAACA TGAGCGCCGT AAAACAGAAA GACCTCGCGG CGCTCGTCGG CTTTCTGGAG ACCGAAATCT ATAAGCATCA TGGGAAAAGT AAGAATGACA AAAATCGTTC GATTTCTGAA ATGCGCATTG TCGCACTCTC AAAGCCTGAA AATCTTCGTG GGCTAGAGGC TGGCACGCTC AACCGGCACC TGACATTTAT CGATCAACTG TTCGACCTCG CGGAGGCCGA GGGCGTCGAC CTCGATCCGA AACTCAAGGT CACAAAGCTG CGCGCAATTG ATGGCGCCGA TGAGCGCGAA CGGGATGAAC GTCTCAAGCT GCCGCTTTCG AAGATCGAAG ATCTATTTGC ACAACCGCCA TTCGTGAACT GTGCTGATTG GAATCGACAA TCAAAAGAAG GGGCCGCCGG AAAATCTCTG GTTTTCCATG GCGCCCTTTA TTTTATTCCG ATGTTGATAT TTTATGGAGG CGGTCGACGC GAAGAGTATT GTGGGTTGAT GACAAGCGAT GTCATTGACG ACAATAAAGG AGCGTATCCG TATTTACACA TCGCGAAAAA CAAATTTCGA CGCATCAAAA ATGGCCAGTC AAAGCGCAAT ATCGTCATTC ATCCGGAGTT GATCAGACTT GGATTCCTTC GATACGTCGC GCTCATCCGC TCGCTCGGGT ATGAACTGGT CTTCCCTGAT TTGTTTTCAG CCACAACCAA ATCTCCGTAG
|
Protein sequence | MSAATHLYRR KAVYYWRRRL PNALASWFHK RHLFLSLQTP DPNFARRLVV LLDAKLEEVV TAFEHAEMHL TPARVDGLLR DVVTKHLNKL ERLSAAAKSF PNFDAAQAER DDRRAAWAYR LLHAQGPGAV VRPTDETEMS ADGMTAADIA AVQDHLAMLR INDLVPTRHG ILQNLLVANG APANAMNLAT AQDVYFRGMW MALAQSERRY GGKIVEAGDF VDQILKDRVR SVPREFETPV ERMQPRAPVP YPVDDNPVQE DLDAVDDRFK TMADLLLRKR SKAERWTTKS KQQATQTFTL LAKFMKEERA LENMSAVKQK DLAALVGFLE TEIYKHHGKS KNDKNRSISE MRIVALSKPE NLRGLEAGTL NRHLTFIDQL FDLAEAEGVD LDPKLKVTKL RAIDGADERE RDERLKLPLS KIEDLFAQPP FVNCADWNRQ SKEGAAGKSL VFHGALYFIP MLIFYGGGRR EEYCGLMTSD VIDDNKGAYP YLHIAKNKFR RIKNGQSKRN IVIHPELIRL GFLRYVALIR SLGYELVFPD LFSATTKSP
|
| |