Gene Nham_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0896 
Symbol 
ID4031388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp989800 
End bp991449 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content54% 
IMG OID637969408 
Producthypothetical protein 
Protein accessionYP_576218 
Protein GI92116489 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGCCG CAACCCATCT CTACCGACGA AAAGCCGTGT ACTACTGGCG TCGACGTCTT 
CCGAATGCGC TCGCCAGCTG GTTTCATAAA CGCCATCTGT TCCTGAGCTT GCAAACACCC
GATCCCAATT TCGCGCGGCG TCTGGTGGTT CTGCTCGATG CAAAATTGGA GGAGGTCGTG
ACGGCCTTCG AGCATGCTGA GATGCATCTA ACTCCGGCGC GAGTAGACGG CTTGCTGCGC
GACGTTGTGA CAAAGCATTT GAACAAGCTG GAGCGATTGT CCGCGGCGGC GAAATCGTTT
CCAAATTTCG ACGCTGCTCA AGCCGAGCGC GACGACCGCC GCGCCGCTTG GGCCTATCGC
TTGCTCCATG CGCAAGGACC GGGCGCCGTC GTTCGTCCGA CCGACGAGAC CGAAATGTCA
GCGGACGGCA TGACCGCTGC TGACATTGCT GCGGTCCAAG ACCACTTGGC GATGCTGCGC
ATCAATGACC TCGTGCCCAC GCGGCACGGA ATCCTACAAA ATTTGCTCGT CGCCAACGGT
GCGCCTGCCA ACGCGATGAA CTTGGCGACA GCACAAGATG TGTATTTTCG CGGAATGTGG
ATGGCGCTTG CGCAGTCCGA ACGACGCTAC GGCGGCAAAA TCGTCGAAGC TGGTGATTTC
GTCGACCAAA TTCTTAAGGA CAGAGTTCGA TCCGTGCCTC GAGAGTTTGA GACGCCTGTC
GAGCGCATGC AGCCACGAGC GCCTGTACCA TATCCGGTCG ACGACAATCC GGTGCAGGAA
GATCTGGATG CCGTCGACGA CCGTTTCAAA ACTATGGCCG ATTTACTCTT GCGGAAGCGC
AGCAAGGCAG AGCGTTGGAC CACGAAAAGC AAGCAACAGG CCACACAGAC ATTTACGTTG
TTGGCGAAAT TTATGAAGGA GGAACGCGCA CTCGAAAACA TGAGCGCCGT AAAACAGAAA
GACCTCGCGG CGCTCGTCGG CTTTCTGGAG ACCGAAATCT ATAAGCATCA TGGGAAAAGT
AAGAATGACA AAAATCGTTC GATTTCTGAA ATGCGCATTG TCGCACTCTC AAAGCCTGAA
AATCTTCGTG GGCTAGAGGC TGGCACGCTC AACCGGCACC TGACATTTAT CGATCAACTG
TTCGACCTCG CGGAGGCCGA GGGCGTCGAC CTCGATCCGA AACTCAAGGT CACAAAGCTG
CGCGCAATTG ATGGCGCCGA TGAGCGCGAA CGGGATGAAC GTCTCAAGCT GCCGCTTTCG
AAGATCGAAG ATCTATTTGC ACAACCGCCA TTCGTGAACT GTGCTGATTG GAATCGACAA
TCAAAAGAAG GGGCCGCCGG AAAATCTCTG GTTTTCCATG GCGCCCTTTA TTTTATTCCG
ATGTTGATAT TTTATGGAGG CGGTCGACGC GAAGAGTATT GTGGGTTGAT GACAAGCGAT
GTCATTGACG ACAATAAAGG AGCGTATCCG TATTTACACA TCGCGAAAAA CAAATTTCGA
CGCATCAAAA ATGGCCAGTC AAAGCGCAAT ATCGTCATTC ATCCGGAGTT GATCAGACTT
GGATTCCTTC GATACGTCGC GCTCATCCGC TCGCTCGGGT ATGAACTGGT CTTCCCTGAT
TTGTTTTCAG CCACAACCAA ATCTCCGTAG
 
Protein sequence
MSAATHLYRR KAVYYWRRRL PNALASWFHK RHLFLSLQTP DPNFARRLVV LLDAKLEEVV 
TAFEHAEMHL TPARVDGLLR DVVTKHLNKL ERLSAAAKSF PNFDAAQAER DDRRAAWAYR
LLHAQGPGAV VRPTDETEMS ADGMTAADIA AVQDHLAMLR INDLVPTRHG ILQNLLVANG
APANAMNLAT AQDVYFRGMW MALAQSERRY GGKIVEAGDF VDQILKDRVR SVPREFETPV
ERMQPRAPVP YPVDDNPVQE DLDAVDDRFK TMADLLLRKR SKAERWTTKS KQQATQTFTL
LAKFMKEERA LENMSAVKQK DLAALVGFLE TEIYKHHGKS KNDKNRSISE MRIVALSKPE
NLRGLEAGTL NRHLTFIDQL FDLAEAEGVD LDPKLKVTKL RAIDGADERE RDERLKLPLS
KIEDLFAQPP FVNCADWNRQ SKEGAAGKSL VFHGALYFIP MLIFYGGGRR EEYCGLMTSD
VIDDNKGAYP YLHIAKNKFR RIKNGQSKRN IVIHPELIRL GFLRYVALIR SLGYELVFPD
LFSATTKSP