Gene Nham_0874 details

Gene Information

• Locus tag: Nham_0874
• ID: 4031423
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 966894
• End bp: 967571
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637969389
• Product: hypothetical protein
• Protein accession: YP_576199
• Protein GI: 92116470
• COG category: [S] Function unknown
• COG ID: [COG3619] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTCTC TGGATGTTGC TGCCAGTTCG CCGAGGCGCG GCGACGAAAC GGTACAGATA 
TCGCTGCTGC TCGCCTTCGC CGGCGGTTAT CTCGACGCCT ATACTTGGAT TATCCACGGC 
GTGATGGCCA ACGCGCAGAC GGCCAACTTG GTCTTGCTCT GGGTTCACGG CACGGTTGGC 
GAATGGGAAC AAGCCGTTCG TTTTGTTCCT CCGATTGCCG CATTCGCGGC GGGCGTTGTC 
ATCGCGGCGT GGATGCGTCG CTCCATTGGA GATCGGGCCA CTACGATCAG CACGCTCATC 
GAAATTGTGC TGCTGGTCGC GGTCGGTATC CTGCACAATC GGCTGCCGGA TCTGGCGGGC 
ACGCTCGGCA TTTCATTCGT TGCCGCGATG CAAACGGCGA TCTTCACCAG GGTCGAAGGG 
GTGGCATACA ACTCGGTGAT GATCACCGGC AACCTGCGCC AGGCGATTGA AGGGCTGGTT 
GCCGTGGTTT CCGGGCAACT CAGTTCGCTT CGCCGCTCCG GAATCTTCTT CGCACTGTGT 
GTCGCTTTTG GCATAGGGGC GGCCGTGGGC GCCTATGCAA CGAGGGGCAG ACCAAACCTC 
GCTCTTAGTC TGCCGGTGGG AGCCTTGCTG ATCGTCTTGT TCCGCCGCGA GATACGTCCC 
AACAAGGAGT GCCCATGA 

 

Protein sequence

MSSLDVAASS PRRGDETVQI SLLLAFAGGY LDAYTWIIHG VMANAQTANL VLLWVHGTVG 
EWEQAVRFVP PIAAFAAGVV IAAWMRRSIG DRATTISTLI EIVLLVAVGI LHNRLPDLAG 
TLGISFVAAM QTAIFTRVEG VAYNSVMITG NLRQAIEGLV AVVSGQLSSL RRSGIFFALC 
VAFGIGAAVG AYATRGRPNL ALSLPVGALL IVLFRREIRP NKECP