| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0858 |
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| Symbol | |
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| ID | 4031678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 951001 |
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| End bp | 951870 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637969375 |
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| Product | phage integrase |
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| Protein accession | YP_576185 |
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| Protein GI | 92116456 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACA AGGCCATAAG CCCGCTGCGG CAGCGCATGA TCGAAGACAT GACGATCCGC
AAGTTCGCGC CGAAGACTCA ACATGACTAC CTTCAGAGGG TCAAGAACTT CGCTGTCTAT
CTTCGCCGCT CGCCCGACAC GGCAAGCGCA GAGGACGTGC GGCGCTACCA ACTTCACCTG
ACGGCGAGCG GCGTTGGCGT CCCCACCGCC AACCAGACGG TCTCGACGCT GCGGTTCTTC
TTCAAAGTCA CGCTCGGGCG CGCCGACCTC GTCGAACGCA CGGCATTCGT CCGTGAACCG
AGCAAGCTGC CGGTGGTGCT CAGCCCGGAG GAAGTGGCGT GCCTGCTCGA TGCGGTGCCG
GCGCTCAAGT ACAAGGCGGC GCTGAGCGTG GCTTACGGGG CGGGATTGCG CGTCTCCGAG
GTGGTGGCGC TGAAGGTCGG TAACATCGAC AGCAAGCGCA TGATCATCCG CGTCGAGCAA
GGCAAAGGCC GCGAATACCG CTACGTGATG CTGTCGCCGC ATCTGCTTGA ACTTTTGCGT
GCCTGGTACA AGGCGGCACG CCCACAGGGC TGGCTGTTTC CAGGACGAGA CCGCGTGCGG
CAGATGACAA CGCGCCAACT CAATCGCGCC TGCCATGCCG CCGCCGACAT GGCCGAGATC
GGTAAGCCGG TGTCTATGCA TACGCTGCGA CACAGCTTCG CCACTCACCT ACTCGAGCAG
AACATCGATA TCAGAGTGAT CCAGGTCCTG CTCGGTCATG CCAAGCTCGA CACCACGGCG
CTCTACGCGC GCGTCGCCAC CAAGGCGATC CAACAGGTCA TGAGCCCGCT CGACCGCATC
ACCCTGACGC AAGCCGAGCC GCCTGCTTGA
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| Protein sequence | MTDKAISPLR QRMIEDMTIR KFAPKTQHDY LQRVKNFAVY LRRSPDTASA EDVRRYQLHL
TASGVGVPTA NQTVSTLRFF FKVTLGRADL VERTAFVREP SKLPVVLSPE EVACLLDAVP
ALKYKAALSV AYGAGLRVSE VVALKVGNID SKRMIIRVEQ GKGREYRYVM LSPHLLELLR
AWYKAARPQG WLFPGRDRVR QMTTRQLNRA CHAAADMAEI GKPVSMHTLR HSFATHLLEQ
NIDIRVIQVL LGHAKLDTTA LYARVATKAI QQVMSPLDRI TLTQAEPPA
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