Gene Nham_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0828 
Symbol 
ID4032695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp918966 
End bp920285 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content68% 
IMG OID637969354 
Producthypothetical protein 
Protein accessionYP_576164 
Protein GI92116435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.734723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTC CGCTCGCCAT CGCCGCGGTC ACCGCGATCC TCAAGGACCT GCTCAACGAA 
GGGCTGATCA ACAACGACCT GTCGCCGGTC GGGAGTTTTG CGGTCAGCGC GCTGCCGCCG
GACCGCATCA CCACGGGCGA AACGGAGGAC AACCGGCTCA ATCTGTTCCT TTATCAGGTC
ACGCCGAACA TCGGCTGGCG TAACGCGCAG CTGCCCTCGC GCGATACGCA GGGCGCGCGG
CTCGCCAATC CCCCGCTCGC GCTCGACCTC CATTATCTGC TCACCGCCTA CGGCTCGGTC
GATCTCAACG CCGAAATCCT GCTCGGCTTT GCGATGGACC TGCTCAACGA AACGCCGATC
CTGACGCGAG ACATGGTGCG TCGCGCCCTG ACGCCGCAGA ATCCCGTACC GGTCGCCCTC
ATTCCACCCG ATACGCAGGG CCGCACCGCC ATCGACCTCG CCGACCAGAT CGAGACGCTG
AAGATCGTGC CGCAGTTTCT CAGCGCCGAC GAACTGTCGA AGCTGTGGAC CGCGATGCAG
GCGCGTTATC GGCCGACCGT TGCCTATCAG GTGACGACCG TGATCATCCA GGGCACCCGG
CCGACGCGCA CCGCGCTCCC GGTGCTGAGC CGCGGGCAAG GCGACAGCGG CGTCGCAACG
CAACCCTCCA CCGCCGCGCC ACTTCCCGAC TGGCCGACGC TCACCGCGCT GACAATCGTG
TCCGCCCCCG GCGAAGGTCC CCGCACCGGC GCCGAAATGG GCGACACGCT GCTGCTGCAG
GGCGTCCTTC TCGCGGGCAA CACTGTCACC GCCGAGTTTC GTCACCGACG ACTCGCCAAT
CCTCTCGAGA TCGTTGCCAC GCCGGGTCCC GATGCCGGAA GCATGACCCT CGATCTGCCA
GGCGCCGCGG ATGCCGCCGC GCCGAACTGG CCCGCCGGCG CCTATGGCGT CGCGCTCCGC
ATCGTGCGGG CAGGGAAACC GATACGGCGC ACCAACGAAC TCCCGCTGAC CCTCGCGCCC
CGCCTGACCG CCGTGCCGAC GCTCGGCATG GCGAGCGGGC AGAGGAACCT GACGCTCGCG
GTCGCGCCGC CCGTCTGGCC GGAGCAGCGC GTCGACATTC TCGTCGGCAA CGATCCCTAT
CAGGCGACCG TCGCTGCGAA GACGGAGACC CTGGTCGTGC CTGTGCCAGG CCTGACACCG
TCCGATGTGC CGATCCCGGT CCGGCTGCGG GTGGATGGCG CAGAAAACAA CCTCGTCCGC
GATCGGCGCC TCCAGCCGCC GCAGTTCGAC CCGCAACAAT CCGTCATGGT GCCCGCATGA
 
Protein sequence
MSSPLAIAAV TAILKDLLNE GLINNDLSPV GSFAVSALPP DRITTGETED NRLNLFLYQV 
TPNIGWRNAQ LPSRDTQGAR LANPPLALDL HYLLTAYGSV DLNAEILLGF AMDLLNETPI
LTRDMVRRAL TPQNPVPVAL IPPDTQGRTA IDLADQIETL KIVPQFLSAD ELSKLWTAMQ
ARYRPTVAYQ VTTVIIQGTR PTRTALPVLS RGQGDSGVAT QPSTAAPLPD WPTLTALTIV
SAPGEGPRTG AEMGDTLLLQ GVLLAGNTVT AEFRHRRLAN PLEIVATPGP DAGSMTLDLP
GAADAAAPNW PAGAYGVALR IVRAGKPIRR TNELPLTLAP RLTAVPTLGM ASGQRNLTLA
VAPPVWPEQR VDILVGNDPY QATVAAKTET LVVPVPGLTP SDVPIPVRLR VDGAENNLVR
DRRLQPPQFD PQQSVMVPA