| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0691 |
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| Symbol | fliF |
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| ID | 4031317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 763938 |
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| End bp | 765560 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637969226 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_576038 |
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| Protein GI | 92116309 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAAGGTC TGCTGGCATT TCTGAAGGGC CTGGGCCCAT CCCGGCTGAT GGCGATGGTC
GCGGTCACCA CCGCACTGAT CGGCTTCTTC GCGTTCGTCA TCATGCGCGT CACGGCCCCG
CAGATGACGA CGCTCTTTAC CGACCTCAGC GTCGAGGACT CCTCCGGCAT CATCAAGGAC
CTCGAACGTC AGGCAATCCC CTACGAACTG CGGAACGACG GCGCCGTGAT CATGGTGCCG
AAGGACAAAG TGACGCGGCT GCGCATGAAG CTCGCCGAGG CAGGTCTGCC CAAGGGCGGC
GGGGTCGGCT ACGAGATCTT CGACAAATCC GACGCGCTCG GCACCACCAG TTTTGTCCAG
AACATCAATC GCCTGCGCGC ACTTGAGGGC GAGCTCTCCC GCACCATCAA GGCCATCGAC
CGCATTCAGG ACGCCCGCGT CCATCTGGTG CTGCCCGACC GGCCGCTGTT CTCGCGCGAA
GCGCCGCAGC CTTCGGCATC GATCGTTCTG CGCGTCCGCG GCGGCCTCGA ACCGCAGCAG
ATCCGCGCCA TCCGCCATCT CGTCGCCTCG GCCGTCAACG GATTGAAACC GCAGCGAGTG
TCCATCGTGG ACGAAACCGG CCAGTTGCTT GCCGATGGCT CGGCGACCGA CGCCGACGGC
ACGACCGGAG ACGAGCGGCG TACCGCATTC GAAAAGCGAA TGCGCAATCA GGTCGAGGCC
ATCGTGTCGT CGGTGGTCGG AAGCGGCCGT GCGCGCGTCC AGCTCTCCGC CGACTTCGAT
TACAACAAGA TTACCCAGAC CTCGGACAAG TTCGATCCGG AGGGCCGGGT GCTGCGATCA
AGCCAGACCC GCGAGGAATC CTCCGTGACC GCCGACAACA ACGGCCAGGT CACGGTCAAC
AACGAACTGC CCGGCAACCA GCAATCGGAC AATCCAAGCC CCGCGCGCGA CCAGAGCAAG
AAGAGCGAAG AAACCAACAA CTACGAGATT TCCCGCACCA CCAAGACCGA GGTGACCGAA
GCCGGCCGCG TCAACCGCAT TTCTGTCGCC GTTCTCGTCG ACGGCACCTA TACCAAGAAT
GACCAGGGCC AGATGGTCTA TGCGGAGCGC AGCAAGGAAC AACTCGACCG CATCGCGACG
CTGGTGCGCT CAGCCATCGG TTTCGACCAG AAGCGCGGCG ACCAGGTCGA GGTCGTCAAC
CTCAAATTCG CCGAGCCGCC CGCCGCCGTG CCGCTCGCCG AGCCGGCCGG TTTGCTGGGA
ATGATGGCAT TGACGAAAGA CGACGTGATG TACGTCATCG ATCTCGCCGT CATGTTGCTG
CTCGGCCTCG TGGTGACGTT CATGGTGATC CGGCCGCTGG TCCGCCGTAT CCTGGCGTCG
GAGCCGGCCC CGGCCGGCGC CGCACCGTCC CAGCTTCCTG CCCCGGCCGA CGCCACCGCT
CAGGCCGGCG CGACCGGGCA AAATCTCGTT CCCGGCGGCA GCGCCACCGC ACAGTTGATC
GACGTTGCCC AGGTGCAAGG GCAGGTCCAC GCCCAGTCGG TGCACCGGGT CGGCGAACTG
GCCGAGCGCA ACCCGGCCGA AACCGCTTCC ATCATCCGTC AATGGCTTGC CGAACCCGCG
TGA
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| Protein sequence | MQGLLAFLKG LGPSRLMAMV AVTTALIGFF AFVIMRVTAP QMTTLFTDLS VEDSSGIIKD
LERQAIPYEL RNDGAVIMVP KDKVTRLRMK LAEAGLPKGG GVGYEIFDKS DALGTTSFVQ
NINRLRALEG ELSRTIKAID RIQDARVHLV LPDRPLFSRE APQPSASIVL RVRGGLEPQQ
IRAIRHLVAS AVNGLKPQRV SIVDETGQLL ADGSATDADG TTGDERRTAF EKRMRNQVEA
IVSSVVGSGR ARVQLSADFD YNKITQTSDK FDPEGRVLRS SQTREESSVT ADNNGQVTVN
NELPGNQQSD NPSPARDQSK KSEETNNYEI SRTTKTEVTE AGRVNRISVA VLVDGTYTKN
DQGQMVYAER SKEQLDRIAT LVRSAIGFDQ KRGDQVEVVN LKFAEPPAAV PLAEPAGLLG
MMALTKDDVM YVIDLAVMLL LGLVVTFMVI RPLVRRILAS EPAPAGAAPS QLPAPADATA
QAGATGQNLV PGGSATAQLI DVAQVQGQVH AQSVHRVGEL AERNPAETAS IIRQWLAEPA
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