Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0562 |
Symbol | hemC |
ID | 4031310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 622408 |
End bp | 623358 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637969092 |
Product | porphobilinogen deaminase |
Protein accession | YP_575912 |
Protein GI | 92116183 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.264968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAATCCT CCGGTGAGAC AGACATTCTG GCAACGATAG GCACCCGGGG CAGCGCGCTG GCGCTGGCGC AGGCCAATGA GGTGCGGGAC CGACTGGCGC GGGCGCATCA GGTGGCGCCC GAGCGGATCG TCATCAAGAC CATCCGGACC TCGGGCGATG CCATTCAGGA CCGGCCGCTG TTCGATGTCG GCGGCAAGGG ACTTTTTACC AAGGAGATCG AGGAAGCCCT GCTGGCCGGC AGCATCGACT TCGCGGTGCA TTCGTCCAAG GACGTGCCGA CGTTTCTGCC TGATGCCACC TGGCTGCCGG CGTTTCTGCC GCGCGAGGAC GTGCGCGACG CCTTCATCAG TCCGCGCGCC GCGTCATTGA ACGATCTGCC GGCAGGCTCG ATCGTCGGGA CCGCGTCGCT GCGGCGGCAG GCCATGGTGC TGCGGCTGCG CCCGGATCTG AAGGTGAGCG TCATCCGCGG CAATGTCGAG ACGCGCTTGC GCAAGCTCGT GGCGGGGGAG GCCGACGCCA CGCTGCTGGC GCTGGCCGGC CTGAACCGCC TCGGCTTGCA GGACAGGGCG ACGCGCATTC TCGAGACCGA CGAATTCCTG CCGGCGGTCG GGCAGGGCGC CATCGCGATC GAATCGCGCC GTGATGACGA CCGCATCAAC GCGTTCGTGA AGGCGATCGG CGATTCTGAA ACGGAAGTGG CACTGAGCGC CGAGCGGAGC TTTCTGGCGC TGCTTGACGG CTCCTGTCGC ACGCCGATCG GCGGTCATTG TCGCGTCAAC GGCGACCGCA TTCATTTCCG CGGCCTCATC ATTTCTCCCG ACGGCACGCA GTCCTACGAG ACCACGCGCG AAGGCGCGCG CGCGGATGCC GCCGCGCTTG GTGCGGACGC GGCGCGTGAA CTGCGCGAGC GCGCCGGCGA GAAATTCTTC ACGCTGTTTG CCGGAGCCTG A
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Protein sequence | MQSSGETDIL ATIGTRGSAL ALAQANEVRD RLARAHQVAP ERIVIKTIRT SGDAIQDRPL FDVGGKGLFT KEIEEALLAG SIDFAVHSSK DVPTFLPDAT WLPAFLPRED VRDAFISPRA ASLNDLPAGS IVGTASLRRQ AMVLRLRPDL KVSVIRGNVE TRLRKLVAGE ADATLLALAG LNRLGLQDRA TRILETDEFL PAVGQGAIAI ESRRDDDRIN AFVKAIGDSE TEVALSAERS FLALLDGSCR TPIGGHCRVN GDRIHFRGLI ISPDGTQSYE TTREGARADA AALGADAARE LRERAGEKFF TLFAGA
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