Gene Nham_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0452 
Symbol 
ID4030087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp498435 
End bp499070 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content67% 
IMG OID637968980 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_575802 
Protein GI92116073 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGGCA TTTTCACCAG CCCGCTCGCC GCCTTCGCGC TGACCTCGCT CGTCATCGAG 
ATGACGCCGG GGCCGAATAT GGCGTATCTC GCCGCGCTGT CGCTGTCGCA AGGTATCCGC 
GCCGGCCTCG CCGCCGTCAT CGGCGTCGCG CTCGGCCTCG CCGTTTATGG CGCGGCGGCT 
GCGCTCGGTC TCAGCGCGGC GATCGACAAT TCGCCGCTGC TTTACGAGGT GCTGCGCTGG 
GGCGGCGTCG TCTATCTGCT GTGGCTCGCC TGGGAGGCGT GGGCGAACGA AGCGGAGACT 
TCCCCGGAAA ACACCGGTGA TCTCGACGCC CGGCCCGGAC AGGCGTTTCG CCGCGGCCTC 
GTCACCAATC TGCTCAATCC CAAAGCGGCG GTATTCTATG TCGCGGTGCT TCCGGACTTC 
ATCCAGATCG GCAGAGGGTC GGTCGCGATG CAGACGCTGA TGTTGTCGGC GCTCTATGTC 
GGCATCGCCA CGCTGGTCCA TCTCGTCATT GTGCTGCTGG CCTCGCGCCT GCAAAGCGTG 
ATCCAGACGC CGGACAAGCG CAGGACCATC CGGCGCGTGC TGGCGGTGGC GCTTGCCGCC 
ATCGCCATCT GGTTCGCCCT CAGCACCGGC CGCTAA
 
Protein sequence
MGGIFTSPLA AFALTSLVIE MTPGPNMAYL AALSLSQGIR AGLAAVIGVA LGLAVYGAAA 
ALGLSAAIDN SPLLYEVLRW GGVVYLLWLA WEAWANEAET SPENTGDLDA RPGQAFRRGL 
VTNLLNPKAA VFYVAVLPDF IQIGRGSVAM QTLMLSALYV GIATLVHLVI VLLASRLQSV 
IQTPDKRRTI RRVLAVALAA IAIWFALSTG R