Gene Nham_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0427 
Symbol 
ID4030121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp471291 
End bp472130 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content64% 
IMG OID637968956 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_575778 
Protein GI92116049 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTAT CCGGTTCATC GGCGGTGCCG ATCGGCAGCG AGGCGTCGGA GCGCGATTCT 
CGAACATCGG CGGCACGCGT GCTGTTGCCG GTCGCCGTGC TCGCGGCCGG CGTTCTGGTG
TGGGATCTGG TGGTGCGGAT CAACGGGATT CCGCCCTATG TGCTGCCGGG CCCAATGCTG
GTGGCGGCGA CGCTGGTGCA GGACTGGCCG ATCCTGTGGC AATCACTGCT GACGACCTTG
CTGACCACGG GGGAGGGCTT TGCCGCCGCA ACTGTGGGCG GCGTCGCGCT GGCGCTGCTG
TTCAACCAGT CGAAATGGCT GGAACATGCG CTGTTGCCTT ATGCGATCAT CCTGCAGGTC
ACGCCGGTGA TCGCGATTGC GCCGCTGCTT TTGATCTACC TGCCGCAGCA GACCGCGGTG
GTTGTCTGCG CCTGGATCGT CGCGTTCTTT CCGGTGCTGT CGAACACCAC GCTCGGCCTT
AATTCCGTGG ACCGCAACCT CGCCGGGTTG TTCCAGCTCT ATGGTGCCTC GCGGATGCAG
ACGCTGCGAT ATCTGAAACT GCCGGCGGCC CTGCCGTATA TTCTCGGCGG ATTGCGCATC
GCCGGCGGCC TGTCTCTGAT CGGCGCCGTG GTTGCGGAAA TCGCGGCGGG TTCGGCCGGC
GCGGGGTCGG GTCTCGCCTA CAGAATTGCG GAGTCCGGCT ACCGGCTCAA CATTCCGCGC
ATGTTCGCGG CGTTGTTGTT GCTCTCGGTG GCGGGCATCG TCATTTATAT GTGTCTCGCG
GCGGTATCGC ATCTGATGTT GCGGCGCTGG CACGAAAGCG CGCTTGGGAA GGAAAACTGA
 
Protein sequence
MTVSGSSAVP IGSEASERDS RTSAARVLLP VAVLAAGVLV WDLVVRINGI PPYVLPGPML 
VAATLVQDWP ILWQSLLTTL LTTGEGFAAA TVGGVALALL FNQSKWLEHA LLPYAIILQV
TPVIAIAPLL LIYLPQQTAV VVCAWIVAFF PVLSNTTLGL NSVDRNLAGL FQLYGASRMQ
TLRYLKLPAA LPYILGGLRI AGGLSLIGAV VAEIAAGSAG AGSGLAYRIA ESGYRLNIPR
MFAALLLLSV AGIVIYMCLA AVSHLMLRRW HESALGKEN