| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0396 |
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| Symbol | |
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| ID | 4030205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 437888 |
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| End bp | 438457 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637968925 |
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| Product | TadE-like |
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| Protein accession | YP_575747 |
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| Protein GI | 92116018 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4961] Flp pilus assembly protein TadG |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.385276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCCAT TCCCCCGTTT CAGGACCGTA GCCGCAAGGG TGGCCGGCCG TTTCCGCGGC
AATCAGCGCG GGTCCGCGGC GGTGGAGTTC GCTCTCGTCG CGCCGCTGTT CTTCGCGCTG
CTGTTTGCGA TCATCGAGAC CGGCATGGTG TTCTTTGCGA GCCAGAGCCT GGAGACCACG
TTGCAGGACT CGGCGCGCAT GATCCAGACC GGTCAGGCAC AGATCGCCAA GTACGACAAG
GCGAGCTTTA AGAAAGACGT CGTCTGCGCG AATGCGAGCG TGCTGTTCGA TTGCGAGAAT
GGAATCTTTG TCGATGTCCA TAGCTACCCG TCCGGATTCG GAAGCGTAGA GATCGACGAT
TCGATCACCG CGGATCCGAT CACCGGGGAC AGAAATTTCG TCGATAATAC GCAATACAGC
GCCGGCGGTC CGGGAGATAT CGTCGTCGTG CGGCTGTTCT ATCAGTGGCC GCTGTTTGTC
ACGGGACTCG GCTACAACCT CGCCAACCTG AGCGGCAGCA AGCGGCTGCT GGCAGCGACG
GTCGCCTTCA AAAACGAGCC CTATAGCTGA
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| Protein sequence | MSPFPRFRTV AARVAGRFRG NQRGSAAVEF ALVAPLFFAL LFAIIETGMV FFASQSLETT
LQDSARMIQT GQAQIAKYDK ASFKKDVVCA NASVLFDCEN GIFVDVHSYP SGFGSVEIDD
SITADPITGD RNFVDNTQYS AGGPGDIVVV RLFYQWPLFV TGLGYNLANL SGSKRLLAAT
VAFKNEPYS
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