| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0386 |
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| Symbol | |
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| ID | 4030195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 427875 |
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| End bp | 428852 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637968915 |
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| Product | type II secretion system protein |
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| Protein accession | YP_575737 |
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| Protein GI | 92116008 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGACT TCCTGATCGA GAAACTCCAC GACCCGCAGT TCATGACGAT GGTGCTCGCC
GCCATCGCCG CCAGCGCAAC TGTCTATACT CTGATCACGC CGTTCTTCGC GGCGGAGGGG
CTCACCAAGC GGATGAAGGC CGTCGCCAGC GAGCGCGAAC GCATCCGGCA GCGCGAGCGC
GAGCGGCTCG CGAAATCCGA AAAGGTCTCG CTGCGTCAGG CCCCGAAGCA GTTCGTCTCG
AAGGTCGTGG AAGATCTCAA TCTCGGCAAG TGGGTGGCGC AGGAAGCCGC ACGCGAGAAA
CTCGTCATGG CGGGGTATCG CGGTCAGGCG CCTTACGTCA CCTTCCTGTT CTTCCGCATG
GTCACCCCGA TCGTGATGCT GATCGGAGCG ATCGTCTACG TTTTCCTGCT ATCACACATG
CAGCAGTCGA CCCCGATCAA GATCGGCATC TGCATCGGCG CCGCGTTTTT CGGCTTGCAG
GCGCCGATGC TGTTCCTGAA GAACGCCATC ACCAAACGCC AGATCTCGAT CAAACGGGCC
TTCCCGGACG CGCTCGATCT GCTGCTGATC TGCATCGAAT CCGGCATGTC GATCGAAGTC
GCGTTCCGCA AGGTCAGCAC GGAAATCGGC AGCCAGTCGG TCGCGCTGGC CGAGGAGTTC
ACGCTGACCA CGGCCGAATT GTCGTACCTT CAGGACCGCA AGGTCGCCTA CGAGAATCTG
GCAAAACGCA CCGGGGTCGA GGGCGTGAAA TCGGTGTGTC TCGCACTCCA GCAGTCGGAA
CGATACGGCA CTCCGCTCGC ACAAAGCCTT CGCGTGATGG CCCAGGAAAA TCGCGATATG
CGCATGACCG AAGCCGAGAA GAAGGCGGCC GCCCTGCCGC CCAAGCTGAC GGTCCCGATG
ATCGTGTTCT TCCTTCCCGT GCTGTTCGTG GTCATTCTCG GGCCGACGGG CATCAAGATC
GCGGCCCAGA TGCATTGA
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| Protein sequence | MLDFLIEKLH DPQFMTMVLA AIAASATVYT LITPFFAAEG LTKRMKAVAS ERERIRQRER
ERLAKSEKVS LRQAPKQFVS KVVEDLNLGK WVAQEAAREK LVMAGYRGQA PYVTFLFFRM
VTPIVMLIGA IVYVFLLSHM QQSTPIKIGI CIGAAFFGLQ APMLFLKNAI TKRQISIKRA
FPDALDLLLI CIESGMSIEV AFRKVSTEIG SQSVALAEEF TLTTAELSYL QDRKVAYENL
AKRTGVEGVK SVCLALQQSE RYGTPLAQSL RVMAQENRDM RMTEAEKKAA ALPPKLTVPM
IVFFLPVLFV VILGPTGIKI AAQMH
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