Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0242 |
Symbol | |
ID | 4030013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 269777 |
End bp | 270640 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637968778 |
Product | LysR family transcriptional regulator |
Protein accession | YP_575602 |
Protein GI | 92115873 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.546914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTGATC TGGAGCTGTT GCGCAGTTTC GTGTCGGTCG TCGATGCCGG GGGCTTTACC CGCGCCGGTG AGCGCGTCCA TCGCACCCAG TCGACCGTCA GCCAGCAGAT CAAGCGGCTG GAGGACGACT TCGGCCGCCC CCTGCTCAAC CGTGTCGGCA AGAAAGTCAT TCCCACCGAG GACGGCGAGT TGCTGTTGGC TTATGCGCGA AGACTGTTGG CGCTGGCGGA AGAAACCCGC GACGTGCTGG CGCGGCCGAA AGGCGACGGC GTCGTCCGGC TCGGAATTCC GGAGGATTTC GCCGCCTATC GCCTGACCGA ATTGCTGGCG AGTTTCATGC GGTCGCGTCC CGGCCTGCGG CTCGACGTCC GCGCCGACCA GGGCAAGTAT CTCCGCCGCG AGCTTGAACG CGGCGAACTC GACCTGGCGC TGCTCAAGCG GCCGGCCGGC GAGAAGGGCG GCATCAGCAC CTGGCCGGAA CGCGTCCATT GGGTGACGAG CAAGGCCCAT CCCGTCAATC CGGCAACCCA CTCCGTTCCG CTGATCGGTT TTCCGCCGGG CTGCCTGTAT CGGGCGGGCG CCATTCACGC CATCGAAAGC GCAGGCCGCG CCTGGCACAT GGCCTACACC AGTTCGAGCC TCGCAGGCAT CCAGGCCGCG GTCGCCGCCG GTCTGGGTTT AAGCATTCTC TCGGAGATCG CGATCCAGCC CGGGCATCGC GTCCTGACAG CGAAAGACGG TTTTGCGCCG ATCGACAAGA CCGAAGTGGC GCTGGTCGCA GCGCCGGAGG CGAGCCCGGC CACGCTGCGC GTTGCCGACC TGCTGGCGGA TTTCTGCAAT TCGGTACAGA AGGCGGCGGC GTAA
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Protein sequence | MLDLELLRSF VSVVDAGGFT RAGERVHRTQ STVSQQIKRL EDDFGRPLLN RVGKKVIPTE DGELLLAYAR RLLALAEETR DVLARPKGDG VVRLGIPEDF AAYRLTELLA SFMRSRPGLR LDVRADQGKY LRRELERGEL DLALLKRPAG EKGGISTWPE RVHWVTSKAH PVNPATHSVP LIGFPPGCLY RAGAIHAIES AGRAWHMAYT SSSLAGIQAA VAAGLGLSIL SEIAIQPGHR VLTAKDGFAP IDKTEVALVA APEASPATLR VADLLADFCN SVQKAAA
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