| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0096 |
|---|
| Symbol | |
|---|
| ID | 4029635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 111017 |
|---|
| End bp | 111694 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637968630 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_575457 |
|---|
| Protein GI | 92115728 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.480165 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTG ACAACGCGGC GCCCGCAACA AGCGGTCTTG CTTCGGTTGA AGCCGAGATC
GTCCGCGCCT GCCGGGATGC ACGGTGCGAA CGCTCTTCGG TGACGCTGGT GGCGGTGTCG
AAAACCTTCG ATACGGACGC GATTGCGCCG GTGATTGCCG CAGGCCAGCA GGTTTTCGGG
GAAAATCGCG TGCAGGAGGC CCAGCGTAAG TGGCCCGAGC TGATGGCCGC ACATCCCGGC
ATCGCGCTGC ATCTGATCGG ACCGCTGCAG TCCAACAAGG CGAAGGACGC CGTCGGATTG
TTCGATGCCA TCCATTCGGT CGACCGCCCG AGTATTTGCG CGGCGTTGGC CAAAGAAATC
GCCAGCCAAA ACCGGCGGCC GGATCTGTTC GTGCAGATCA ACACGGGGGA GGAACCGCAG
AAAGCCGGCG TCGCGCCATC GGATGCCGAC GCCTTTATCG CGGCCTGCCG CGATACCTAC
GGGCTGACGA TCTCGGGGCT GATGTGCATT CCGCCGGCCG ACGATGCGCC GGCGCCGCAC
TTCGCGCTCA CCGCCAAGAT CGCGAAACGC AACGGGTTGA CGCAACTTTC GATGGGCATG
AGCGCGGACT TTGCCATAGC GATCGCCCTG GGCGCGACCC ATGTGCGGGT CGGCTCGGCG
ATTTTCGGGA CGCGGTAG
|
|---|
| Protein sequence | MTTDNAAPAT SGLASVEAEI VRACRDARCE RSSVTLVAVS KTFDTDAIAP VIAAGQQVFG
ENRVQEAQRK WPELMAAHPG IALHLIGPLQ SNKAKDAVGL FDAIHSVDRP SICAALAKEI
ASQNRRPDLF VQINTGEEPQ KAGVAPSDAD AFIAACRDTY GLTISGLMCI PPADDAPAPH
FALTAKIAKR NGLTQLSMGM SADFAIAIAL GATHVRVGSA IFGTR
|
|---|
| |