Gene Ndas_5396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5396 
Symbol 
ID9249299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand- 
Start bp574811 
End bp575524 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content71% 
IMG OID 
ProductLmbE family protein 
Protein accessionYP_003683281 
Protein GI297564308 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.910627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGG ACTGGTCCCA GGAACGCATC CTGGTGTTCG CGCCCCACCC CGACGACGAG 
ACGCTCGGCT GCGGCGGCCT CATGAGCAAG GCCAAGGCGG CCGGCGCCGA GGTGTTCGTC 
CAGTTCCTCA CCGTCGGGGA CACGGCCGAC ATGTCTCCCA AGGGCTTCTC CACAGCGGAG 
GAGCGCTACG CGGAGATCAA GAAGGTCGCC GACCACTTCC GCTGGGACGA CTGGCACATG 
GCCCTGCCCG GCGACCAGTA CCACCTCAGG CTCGACTCCG TCGCCCGGGT GGACCTCGCC 
CAGCTGATCG AGCGCGAGAG CCCGCTGTCC ATCGAGCGGC TCCGCCCGAC CGTGGTGCTC 
GGACCGCACC ACTCCAGTTA CAACCAGGAC CACCGGGCCG TGGCCGAGGC GGTGCACACC 
GCCCTGCGCC CGTCCAACAC CGCGCTGCGC CACCACCCGA GCCTGGCGCT GGCCTACGAG 
GAGGCCGCCG ACCACTGGCG CTCGGAGCCG CTGTGCCCGC CCAACCTCAT CGTCGAACTG 
GACGAGGTGC AGGTGGTGGA CAAGCTCCAC GGCATGCAGC TGTACGGATC CCAGTCCCAC 
CAGCACCCGC ACACCCGCTC CGAGCCCACC CTGCGCAGCC TCGCCGTCCT GCGGGGCATG 
CAGGCGGGCG TGGCGCTCGG GGAGGGGTTC CACGTGCTGC GCTGCCTGGC CTGA
 
Protein sequence
MTTDWSQERI LVFAPHPDDE TLGCGGLMSK AKAAGAEVFV QFLTVGDTAD MSPKGFSTAE 
ERYAEIKKVA DHFRWDDWHM ALPGDQYHLR LDSVARVDLA QLIERESPLS IERLRPTVVL 
GPHHSSYNQD HRAVAEAVHT ALRPSNTALR HHPSLALAYE EAADHWRSEP LCPPNLIVEL 
DEVQVVDKLH GMQLYGSQSH QHPHTRSEPT LRSLAVLRGM QAGVALGEGF HVLRCLA