Gene Ndas_5365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5365 
Symbol 
ID9249268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp542238 
End bp543842 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content70% 
IMG OID 
ProductOmpA/MotB domain protein 
Protein accessionYP_003683251 
Protein GI297564278 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.794185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.887949 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGGA AGTCGCCCCT ACCCCTGGTC GCGCTGGCGG TCTCGGGCAG CCTCCTGCTC 
AGCGGCTGCA CGGTCACCGA GGGGGTGTCC GACTGGTGGT CCGAGACCTT CGGAAACGCG
TCGGGCCCGC CCGAGGTCAG GGAGGAGTTC CCCTACGTCC GTGAGGGCCG CATCTTCCAG
GACACCGGCC GGGACAACGA GATGCGCTTC GCCGTCACCG GCCTGGAGCG CACCGACGAG
TACACCGTCA TGTACTACGA GGTCACCTAC CTCGACGAGT TCACCGGGCC CAACCGGAAC
ATGAGCATGG CCCACACCCT CGTCGATCCG CTCACCGGCC GCGTCTACCG GCAGTTCCTG
GACGGGGAGG GCCTCAAGTA CGGCTCCGAG AGCCCCAACC AGGACGGCCT CTACCCGGTC
CACGACGGGG TCACCAACGA GTACGTGCGC TACTTCCCGC GACTGCCCGA CGAGGTCCGG
CAGGTCACGT TCGTCGGCAG CGGGCTCGGG GCCATGACCG GCATCCCGGT CGTGGACGTG
GAGGAGGAGC GGGCCGACCC GCAGGACCCC AACGGGGCCG ACCACCTCAC CCCGGACGAC
CCGCCGCCGA GCGGGGAGAA CCTCACCTTC GCCAACCGAC GCCCGGACGC GGACGCCGTG
GCCGACGAGG GCTGGGTGCA GAGCTTCGTG GACTCCGAGA TCGCCTCCAC CACCCGCGAC
GGCGACCGGG AGATCATCTC CCTGCACTCC GACGTCATGT TCGAGTTCGA CCGCTCGGAC
CTGACCTCCG AGGCCGAGGA CGTGGTGCGG CGCGCGGCCA CCAGCCTGGC CCGCAACGTC
GATCCCGACG AGCCCGTCAT CACCGTCATC GGCCACACCG ACAGCATCGG CGACGACGCC
TACAACGACA ACCTGTCGGT GCAGAGGGCC GAGAGCGTGC GTGACCTGCT CGCCGAGGAG
CTGGGCACCG ACTACACCCT TGAGGTGGAG GGCCGCGGCG AGCACGAGCC GATCGCCCGC
GAGGGCGGCC CCGACGACGA CGAGGCGCGG GCGCGCAACC GGCGGGTGGA GTTCTCCTAC
GTCTTCGACA CCACCGTGGA GGCCACGGAG GAAGAGGAGT ACGACGACGA CGCCCTGGGC
GCGGCCCAGC GCAACGTCAC CTGGCCCGCG CCCTACGACG ACGACCCGGG ATCCGTGGTG
GCCGAGGGCG AGCTGGACGG GGTGCGCCTG GAGGTCTACC CGCTGCGCCG CGACGGCGCG
TACGTCATCG GCACCGTGGC GCTGACCAAC ACCACCGACG AGCCGACCAT GCCCGACATG
GGCGGGCAGG AGGCCGTCCA GGCGGGCGGC CCCGAGCAGT TCAACAAGGG CACGCTCGGC
GGCTTCCAGC TGCTGGAGCC GGAGAGCGGC CTGGTGCGCT ACGTGGCCCA GATGGACTTC
GGCGAGGGGC GCTACAGCAG CTTCGCCGAG GAGGTCCACA TGCTCCAGCC CGACAACACC
TACAGCCTGG TCGCGGTCTT CCCCGCGCCG CCGGTGGACG TGGAGGAGCT GACCCTGCGG
GCGGGCCCGT TCGGTGAGTT CGAGGAGATC CCCGTGGAGT ACTAG
 
Protein sequence
MARKSPLPLV ALAVSGSLLL SGCTVTEGVS DWWSETFGNA SGPPEVREEF PYVREGRIFQ 
DTGRDNEMRF AVTGLERTDE YTVMYYEVTY LDEFTGPNRN MSMAHTLVDP LTGRVYRQFL
DGEGLKYGSE SPNQDGLYPV HDGVTNEYVR YFPRLPDEVR QVTFVGSGLG AMTGIPVVDV
EEERADPQDP NGADHLTPDD PPPSGENLTF ANRRPDADAV ADEGWVQSFV DSEIASTTRD
GDREIISLHS DVMFEFDRSD LTSEAEDVVR RAATSLARNV DPDEPVITVI GHTDSIGDDA
YNDNLSVQRA ESVRDLLAEE LGTDYTLEVE GRGEHEPIAR EGGPDDDEAR ARNRRVEFSY
VFDTTVEATE EEEYDDDALG AAQRNVTWPA PYDDDPGSVV AEGELDGVRL EVYPLRRDGA
YVIGTVALTN TTDEPTMPDM GGQEAVQAGG PEQFNKGTLG GFQLLEPESG LVRYVAQMDF
GEGRYSSFAE EVHMLQPDNT YSLVAVFPAP PVDVEELTLR AGPFGEFEEI PVEY