Gene Ndas_5340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5340 
Symbol 
ID9249243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp515594 
End bp516379 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003683226 
Protein GI297564253 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.279807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGGC GTGTTCTGGG CCTGAGCGGG GTCACGGTGC GGAGGGGCGA CGCCCATCTG 
CTGGACGGGG TGGACTGGAC GGTCCTGGAG GGCGAGCGCT GGGTCGTCCT GGGCCCCAAC
GGTGCGGGCA AGACCACACT GCTCAACGTG GCCTACAGCC AGACGCACCC GACCGCGGGC
GAGGTGGAGA TCCTCGGTGA GCGGCTGGGC CGGGTGGACG TGTTCGAGCT GCGTCCGCTC
ATCGGCTACG CGGGCGCCTC GGTGGCGTCG CGGATCGAGG AGGGCACCGA GGTCCTCGAC
ATCGTGCTGA GCGCCGCCTA CGGCTACGTG GGCCGCTTCC GCGAGGAGTA CGGGAACCCG
GACTACGGCC GCGCCCGCGC CCTGCTGGGC CACTGGGGCG TCGCCGACCT GGCCGACCGC
CGGTTCCACA CCCTCTCCGA GGGCGAGCGC AAGCGCGTGC TCATCGCCCG TGCGCTGATG
TCGGACCCGG AGCTGCTGCT CCTGGACGAG CCCGCCGCCG GGCTGGACCT GGGCGGCCGT
GAGGACCTGG TGCGCCGTCT GGGGAGCCTG GCCCGCAACG AGGCCGCGCC CGCGCTGGTG
GTGGTGTCCC ACCACGTGGA GGAGATCCCC GCAGGGACCA CGCACGCCCT GCTGCTGCGC
GGGGGTTCGG TGGTGCAGGC CGGTCCGATC GACGGGGTCC TGACCGCGGA CCACCTGTCG
GAGACCTTCG GGCTCGCGCT GAAGGTGGAG AGGGACGGCG AGCGCTGGAG CGCCCGGGCG
GTCTGA
 
Protein sequence
MDGRVLGLSG VTVRRGDAHL LDGVDWTVLE GERWVVLGPN GAGKTTLLNV AYSQTHPTAG 
EVEILGERLG RVDVFELRPL IGYAGASVAS RIEEGTEVLD IVLSAAYGYV GRFREEYGNP
DYGRARALLG HWGVADLADR RFHTLSEGER KRVLIARALM SDPELLLLDE PAAGLDLGGR
EDLVRRLGSL ARNEAAPALV VVSHHVEEIP AGTTHALLLR GGSVVQAGPI DGVLTADHLS
ETFGLALKVE RDGERWSARA V