Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_5340 |
Symbol | |
ID | 9249243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | + |
Start bp | 515594 |
End bp | 516379 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003683226 |
Protein GI | 297564253 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.279807 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGGC GTGTTCTGGG CCTGAGCGGG GTCACGGTGC GGAGGGGCGA CGCCCATCTG CTGGACGGGG TGGACTGGAC GGTCCTGGAG GGCGAGCGCT GGGTCGTCCT GGGCCCCAAC GGTGCGGGCA AGACCACACT GCTCAACGTG GCCTACAGCC AGACGCACCC GACCGCGGGC GAGGTGGAGA TCCTCGGTGA GCGGCTGGGC CGGGTGGACG TGTTCGAGCT GCGTCCGCTC ATCGGCTACG CGGGCGCCTC GGTGGCGTCG CGGATCGAGG AGGGCACCGA GGTCCTCGAC ATCGTGCTGA GCGCCGCCTA CGGCTACGTG GGCCGCTTCC GCGAGGAGTA CGGGAACCCG GACTACGGCC GCGCCCGCGC CCTGCTGGGC CACTGGGGCG TCGCCGACCT GGCCGACCGC CGGTTCCACA CCCTCTCCGA GGGCGAGCGC AAGCGCGTGC TCATCGCCCG TGCGCTGATG TCGGACCCGG AGCTGCTGCT CCTGGACGAG CCCGCCGCCG GGCTGGACCT GGGCGGCCGT GAGGACCTGG TGCGCCGTCT GGGGAGCCTG GCCCGCAACG AGGCCGCGCC CGCGCTGGTG GTGGTGTCCC ACCACGTGGA GGAGATCCCC GCAGGGACCA CGCACGCCCT GCTGCTGCGC GGGGGTTCGG TGGTGCAGGC CGGTCCGATC GACGGGGTCC TGACCGCGGA CCACCTGTCG GAGACCTTCG GGCTCGCGCT GAAGGTGGAG AGGGACGGCG AGCGCTGGAG CGCCCGGGCG GTCTGA
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Protein sequence | MDGRVLGLSG VTVRRGDAHL LDGVDWTVLE GERWVVLGPN GAGKTTLLNV AYSQTHPTAG EVEILGERLG RVDVFELRPL IGYAGASVAS RIEEGTEVLD IVLSAAYGYV GRFREEYGNP DYGRARALLG HWGVADLADR RFHTLSEGER KRVLIARALM SDPELLLLDE PAAGLDLGGR EDLVRRLGSL ARNEAAPALV VVSHHVEEIP AGTTHALLLR GGSVVQAGPI DGVLTADHLS ETFGLALKVE RDGERWSARA V
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