Gene Ndas_5339 details

Gene Information

• Locus tag: Ndas_5339
• ID: 9249242
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111
• Kingdom: Bacteria
• Replicon accession: NC_014211
• Strand: -
• Start bp: 514758
• End bp: 515537
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 75%
• Product: hypothetical protein
• Protein accession: YP_003683225
• Protein GI: 297564252

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.795467
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.179631
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCATCTCT CGTCCGCACC ACTCGTCGCC TGGGGCAACG CCTGGCTGGC CGGACACGTC 
GGCCTCGACG AGGCCGTCGA CGCCGTCGAG CGGCGCGGTG GTCCCAACCT GATCGGGACA 
GTACCGGCAG TGGACCTGCC CTTCGACAGC GGCGTACCGC TGCGGGCCGC ACTGACACGG 
CTGCGCGGCC TGGGGCTGTC CGCCTTCCGG TTGGCCCTGC CCACCTGGGG CGATCCCCTC 
GGGCTCGTGG GCCCCAAGGA ACTCAACCAG GCCGCCGTCG AGGCGCGGGA GGGGGTGCTG 
GTGCGGCTCG CCGACCGGCA GGTGGGCCTG GTGCCCTCCG CCGACCGGCG TGGTTCATCC 
TATGTGGGCG TTTCGTGGAC ACCGTATCCG GCGAACGACG CACTGCCGCA GGTACCCGGC 
CTGGCCGAGG CGGAGCAGGC GCTGAAGCTC GCCCTCATCG AGGCCGCCCG GGCAATGGAG 
GGCGTGGACG ACGTCGCCCC GTTCGCACCG GACGTGCACC GAAGACTGGG CGAACTGGAC 
GGCGGCCCGC CCTCGCTGGC GCGCGGGTAC CCGCCCCGGG CGCACCGTGT GGCGGAGCAG 
GCGGCACGGC TGGCCGGGGT GGTGGAGCTG GCCGAGCCGT CGTCGGGACG GGGACTGACC 
GCCCACCAGG CCACGGCCCG CTCCGAGGGG CTGCGCAGGC TCGACGCGGC GGTGCGCAGG 
GCCCTGGTGG CCGCGCACGG GGCGATCGAC CCGTCCGACC GGGGCGTTCC GGGGCGCTGA 

 

Protein sequence

MHLSSAPLVA WGNAWLAGHV GLDEAVDAVE RRGGPNLIGT VPAVDLPFDS GVPLRAALTR 
LRGLGLSAFR LALPTWGDPL GLVGPKELNQ AAVEAREGVL VRLADRQVGL VPSADRRGSS 
YVGVSWTPYP ANDALPQVPG LAEAEQALKL ALIEAARAME GVDDVAPFAP DVHRRLGELD 
GGPPSLARGY PPRAHRVAEQ AARLAGVVEL AEPSSGRGLT AHQATARSEG LRRLDAAVRR 
ALVAAHGAID PSDRGVPGR