| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5286 |
|---|
| Symbol | |
|---|
| ID | 9249184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | + |
|---|
| Start bp | 450791 |
|---|
| End bp | 451522 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_003683172 |
|---|
| Protein GI | 297564199 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGTC TGGAGTTCGC TCCGCCCAAG TACGTACAGA TCGTGCGGGC GATCCAAGAG
CGCATCGAGG ACGGTACCTA TCCGGTGGGG GAGATGCTTC CCTCCGAGTC GCGGATGGTG
CGCGAGTTCG GGGCCGGGCG CTCCACGGTC GTGCGGGCCC TACAGATCCT GAGCATGCAG
GGGTGGATCG ACCGCGAGCA CGGACGCGGG TCCTTCGTGC GCGGCGTCCC GCAACAGGGC
TCCGAACGCT CCCACGCGGG GGCCAGTGCC TTCGACGCCT CCGAGGAGGC CAAGCGCAAC
CGCATCCTGA CCGCCGGACG CGCCCCGGCC TCCGCCGCCG TGGCCGAGGC GATCGGTGTG
CCCGAGGGCT CCCCGGCGAT CATGCGTCAA CGCCTGGTCC TGGACGAGGG CGAACCGAGT
GAGCTGGTCA CCCTGTGGTT CCCCCTGGAC GTGGCCGAGG GAACCGACCT GGGCGAGACG
CAGCCGATCA GCATTGGCGC ACGCGAACAC GTGCAGATGG TCAAGCAGCT CCGGCCCTCC
AAGGTCGTCG AACGGCTCTG CGCACGCCTG GCCACCGGCG TTGAACGCGA ACCCCTGGGG
CTGGACGAGG GCACTCCGGT CCTGGGCATC ACCGCGCGGA TACTCGATGC CTCCGGGGAC
GTGATCGCCG TCGCTGAGGT GGTGCTCCCC GGTGACCTGC ACGAACTGGA GGACTCCTAC
CCGGCCGTGT AG
|
|---|
| Protein sequence | MSSLEFAPPK YVQIVRAIQE RIEDGTYPVG EMLPSESRMV REFGAGRSTV VRALQILSMQ
GWIDREHGRG SFVRGVPQQG SERSHAGASA FDASEEAKRN RILTAGRAPA SAAVAEAIGV
PEGSPAIMRQ RLVLDEGEPS ELVTLWFPLD VAEGTDLGET QPISIGAREH VQMVKQLRPS
KVVERLCARL ATGVEREPLG LDEGTPVLGI TARILDASGD VIAVAEVVLP GDLHELEDSY
PAV
|
|---|
| |