| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5260 |
|---|
| Symbol | |
|---|
| ID | 9249158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | - |
|---|
| Start bp | 423790 |
|---|
| End bp | 424905 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003683146 |
|---|
| Protein GI | 297564173 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCC CCTCCCCGAC CGCAGGTCCG CCCGCGGGCC CGGTCCGCGT CGCTCTCGTG
GGAACCGGGA ACATCGCCCG CTTCCACGCG GAGGCGCTGT TGTCCCTTCC GGACCGGGCC
GAGGTCGTCG CCGCCGTCGA CGTCGACACC CGCGCCCTGG ACGCGTTCCG CTCCCGCTTC
GCGGTCCCGG CCGGGTACAC CGACCTGGCC GCGATGCTGG ACCGGGAGCG TCCGGAACTG
GTGCACGTGT GCACACCGCC CGGCCTGCAC CGGTCCCAGG CGGAGGCCTG CCTGGGCGCA
GGCGCCTCCG TGCTGGTGGA GAAGCCGCCG GCGCTGAGCC TGGCCGAGGC GGAGGCGATG
GCGGCGGCCG AGGGGGGCGG TCGCGGTCCG TGGATGGCCA CGGTGTTCCA GCACCGCTTC
GGCTCGGGCG CCCGCCGGGT GCGGGCGCTG TCGGAGGCCG GTGTGCTGGG GCGGCCCCTG
GTGGCGTCCT GCCACACGAC GTGGTTCCGA CCCCAGGAGT ACTTCGACGT GCCCTGGCGC
GGCAGGTGGG AGACCGAGGG CGGCGGCCCG ACCATGGGGC ACGGCATCCA CCAGATGGAC
CTGCTGCTCT TCCTGCTGGG CCCGTGGACG GAGGTGTCGG CGGTCGCCCG CCGCCAGGCG
CGCGACGTCG AGACCGAGGA CGTCTCCCTG GCCCGGGTGG ACTTCGCCAA CGGGGCGGTG
GCCAGCGTGG TCAACAGCCT GGTCTCCCCG CGGGAGGAGA GCCGGATCCG GATCGACTTC
GAACGGGCGA CCGTCGAGCT GGTCCACCTG TACGGCTACG GCGACGGGAA CTGGCGCGTC
ACCCCGGCCC CGGGGTTCGA GCAGGAGGTC ACGGCCGCCT GGGAGGCGGG GGAGCACGGG
ACCGACAGCG GGCACCGCGC ACAGATCGCC CGGGTGCTGG AGGCGCTGCG CGAGGGCACC
GCCCCGCCCG TGTCCTCCGC CGAGTCGCTG CGGACGATGC GCCTGGTCGC CGGGGTCTAC
GCCTCCGCCT TCGAGGGGCG GCCCGTCGCC CCCGCCGACC TCGGGCCGGA GTCGCCGTTC
CACGCGCGCA TGGACGGCGG GGCGGTCCGG TGGTGA
|
|---|
| Protein sequence | MSTPSPTAGP PAGPVRVALV GTGNIARFHA EALLSLPDRA EVVAAVDVDT RALDAFRSRF
AVPAGYTDLA AMLDRERPEL VHVCTPPGLH RSQAEACLGA GASVLVEKPP ALSLAEAEAM
AAAEGGGRGP WMATVFQHRF GSGARRVRAL SEAGVLGRPL VASCHTTWFR PQEYFDVPWR
GRWETEGGGP TMGHGIHQMD LLLFLLGPWT EVSAVARRQA RDVETEDVSL ARVDFANGAV
ASVVNSLVSP REESRIRIDF ERATVELVHL YGYGDGNWRV TPAPGFEQEV TAAWEAGEHG
TDSGHRAQIA RVLEALREGT APPVSSAESL RTMRLVAGVY ASAFEGRPVA PADLGPESPF
HARMDGGAVR W
|
|---|
| |