| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5154 |
|---|
| Symbol | |
|---|
| ID | 9249047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | + |
|---|
| Start bp | 294402 |
|---|
| End bp | 295241 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_003683040 |
|---|
| Protein GI | 297564067 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.195409 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGA CGACGGTCCG GGTGCGGTTG GACGTGGCCT ACGACGGCAC GGACTTCTCC
GGGTGGGCCG CGCAGCCAGG TCGGCGCACG GTGCAGGGCG AGCTGGAGGC GGCTCTGGCG
CGGGTGCTGC GCCTGCCGGA GGTGTCGCTG ACGTGCGCGG GGCGCACGGA CGCCGGTGTG
CACGCGCGGG GGCAGGTGGC GCAGGCCGAC ATCCCCGCGC GGACGTGGGA GAGCGAGGGG
GAGCGCGTGC TCCGGCGCCT GGCCGGGGTG CTGCCCAAGG ACGTGCGGGT GCGCGCGGCG
CGGCTGGCGC CGCCCGGGTT CGACGCCCGG TTCTCGCCGC TGTTCCGGCG GTACCTGTAC
CGGGTGAGCG ACGCGCCCTA CGGGGTGGAC CCGCTGCTGC GGCGGGACGT GCTGTGGCAC
CGCAGCCCGC TGGACGTGGA CCGGATGAAC GCTGCGGCGG AGCGCCTGGT GGGCGAGCAC
GACTTCGCGG CGTTCTGCAA GAGGCGCGAG GGCGCGACGA CCATCCGGGA GCTGCTGCGC
CTGGAGTGGA CCCGGGTGGA CGAGCACCTG CTGCACGGGA CGATCCAGGC GGACGCGTTC
TGCCACAACA TGGTGCGCGC GCTCGTGGGC GCGCTCCTGG CGGTGGGCGA CGGGCGCAGG
GACGCGGACT GGCCGGGCAA GGTGCTCGGC GCCGGTACGC GGGACTCGTC GGTGCACGTG
GTGGGGCCGC AGGGGCTCAG CCTGGAGGAG GTGCGCTACC CGGCCGACGA GGAGCTGGCC
GTGCGCGCCT CGGCGACCCG CCGGGTGCGG GAGCTGCCGT GCCGGGGCCA TTCGGACTGA
|
|---|
| Protein sequence | MDETTVRVRL DVAYDGTDFS GWAAQPGRRT VQGELEAALA RVLRLPEVSL TCAGRTDAGV
HARGQVAQAD IPARTWESEG ERVLRRLAGV LPKDVRVRAA RLAPPGFDAR FSPLFRRYLY
RVSDAPYGVD PLLRRDVLWH RSPLDVDRMN AAAERLVGEH DFAAFCKRRE GATTIRELLR
LEWTRVDEHL LHGTIQADAF CHNMVRALVG ALLAVGDGRR DADWPGKVLG AGTRDSSVHV
VGPQGLSLEE VRYPADEELA VRASATRRVR ELPCRGHSD
|
|---|
| |