| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4852 |
|---|
| Symbol | |
|---|
| ID | 9248738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 5750866 |
|---|
| End bp | 5752572 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | integral membrane protein MviN |
|---|
| Protein accession | YP_003682741 |
|---|
| Protein GI | 297563767 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.425556 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGGTC CCGTCACCGA CACCGCCCCC GGGTCCGGAG GGGACTCCGG CGGCGGCTCC
GACCGGGGCG GGGACACCGG GTCGGGCGGC GGCGGCATGA TGCGCTCCAG CGCCATCATG
GCCGTGGGCA CCCTGGCCTC CCGGATCACC GGCTTCGCCC GCACCATCGT GCTCGGCGCC
GCCATCGGCA CCCACCTGCT CGGTGACGCC TACCACACGG CGCACACGAT CCCCTTCATC
CTCAACGACC TGCTCATCGG CGGGCTGATG GCCAGCGTCA TCATCCCCTT CCTGGTCAAG
CGGCGAAAGC GCGACGCGGA CGGCGGCAAG GCCACCGAGG ACCGGCTGTT CACCACCACG
CTGCTGGCGC TGCTGCTGCT CACCGCGGTC GCGATCGCGG CCGCCGAGTT CCTCATCTGG
CTCTACGGCT CCCGGTTCAC GCCGATCCAG TTCGACGCCT CGGTCTACCT CGCGCGGTAC
CTGCTGGCGC AGATCTTCTT CGTGGGCATG AGCGGCCTGC TGAGCGCCAT GCTCAACACC
CGCAACCGGT TCGGCGCGGC CGTGTGGGCC CCGGTGCTGA ACAACCTCGT CATCATGAGC
GTGGCGGCCG TGTTCCTGTG GGTGGCCGGT CCGGGCCGCA CCCCCGAGAC CGTCACCGAC
GGCCAGCTGA CCCTGCTGGG CGCGGGCACC GCGGCCGGTA TGGCGCTCCA GGCCGTCGTG
CTGTTCGCGG CCCTGTCCCG CACCGGCTAC CGCTGGCGGC CCCGCCTGGA CCTGCGCGGC
TCCGGGCTCG GCGACGCCGT GCGCACCGCC GGGTGGATGA TGCTCTACAC CCTGCTCACC
CAGGCCGGAC TGTGGATCAC CACCAACATC GCCAACGCCG CGAACGTGGC GAGCATCAGG
GAGGGCCTGG ACGTCGGCGC GGGCATCAGC GCCTACAACC TGGCGTACCA GCTCTTCCAG
CTGCCGTACG CGATCATCGC GGTCTCCCTC ATCACCGTGC TGCTGCCCCG GATGAGCGCC
CACGCCGACG ACCACGACTG GGACGCGGTC CGCGCGGACT TCTCCCGCAC CCTGCGCGTC
TCCGCGTTCG TGCTGGTTCC GACCGCCTTC GCGGTGGCGA TGTTCGCCGA GCCGCTGTCC
GTCCTGGCCT TCGCGCGCGG GTCCATCTCG GTGGACGACG CGGAGAGCAT CGGCCAGATC
CTCGCGGTCA TGTCGCTGGG GCTGGTGCCC TTCACCGTGT TCCAGCTCAT GCTGCGCGTG
TTCTTCGCCA TGGGCGACAC CCGCACCCCC GCGATGCTCG GCCTCGCCAA CCTGGCCGTG
CACAGCGCCC TGGCGCTGAC GTCCTACCTG GTGCTTCCGC CGAACCTGGT GGTCGTGGGC
GTGGCCGCGG GCTTCATGAT CTCGTTCCTG TCCGGGCTGA CCATCGCCGG AATCGTGCTG
AGCCGGCGCA TCGGGGGGCT TGACGGCAAG CACGTCATTG GCACATTGTT GCGCCTGCAC
CTGGCCGCCG TCCCGAGCAT CGCGGCCGGC CTCGGTGTGC TCTGGGCCTT CGACACCTAC
GTCGGCCCCG GCCTGGCCAC CTACATCGGC GCCCCGGCCG CCGGATGCGT CCTGGGCGCG
CTGCTCTTCC TGGGATGCGC GCGGCTGCTG CGCGTCCCGG AGCTGACCGG TGCCGTGGAA
CTGATCCGCG CCCGGCTGCG TCGTTGA
|
|---|
| Protein sequence | MPGPVTDTAP GSGGDSGGGS DRGGDTGSGG GGMMRSSAIM AVGTLASRIT GFARTIVLGA
AIGTHLLGDA YHTAHTIPFI LNDLLIGGLM ASVIIPFLVK RRKRDADGGK ATEDRLFTTT
LLALLLLTAV AIAAAEFLIW LYGSRFTPIQ FDASVYLARY LLAQIFFVGM SGLLSAMLNT
RNRFGAAVWA PVLNNLVIMS VAAVFLWVAG PGRTPETVTD GQLTLLGAGT AAGMALQAVV
LFAALSRTGY RWRPRLDLRG SGLGDAVRTA GWMMLYTLLT QAGLWITTNI ANAANVASIR
EGLDVGAGIS AYNLAYQLFQ LPYAIIAVSL ITVLLPRMSA HADDHDWDAV RADFSRTLRV
SAFVLVPTAF AVAMFAEPLS VLAFARGSIS VDDAESIGQI LAVMSLGLVP FTVFQLMLRV
FFAMGDTRTP AMLGLANLAV HSALALTSYL VLPPNLVVVG VAAGFMISFL SGLTIAGIVL
SRRIGGLDGK HVIGTLLRLH LAAVPSIAAG LGVLWAFDTY VGPGLATYIG APAAGCVLGA
LLFLGCARLL RVPELTGAVE LIRARLRR
|
|---|
| |