Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4803 |
Symbol | |
ID | 9248686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 5692743 |
End bp | 5693420 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003682693 |
Protein GI | 297563719 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCGACC TGCCCCAGCT GCCGGATGAT CCCTCCAAGC TGGCTCGCGA GCCGCTCAGG GAGCAGATCC GGCAGGTACT GGTCGAGGGC CTGCTGTCCG GTCGCTGGCA GCCCGGAGAG CGGATCGTGG AACGCCGCGT CGCCACGGAG CTGAGGGTGA GCCAGGCCCC GGTGCGCGAG GCGCTGCGCG AGCTGGAGAC CCTGCGCCTG ATCGAGACCG TCCCCAACAA GGGCGCCCGG GTGCGGGCCT TCGGGGTCCA GGACATGGCG GAGATCTACC CCGTGCGCGC CGGACTGGAG CTGGTCGCGG CGCAGTTGGC CGCGCCCCGG CTGGCCGAGG ACCCCTCCCC CCTGGAGCGG GAGGTGGAGG CGCTCCAGCG GGCGACCGCC CAGGGCGACG TGTCCGAGCA GATCCGGCAC AGCGTGGAGT TCCACCGCGA GGTCGTGCGC GCCGCCCACA ACAGCGTGCT GCTGCACACC TGGGAGTCAC TGGGCGTGGA GGTGTGGACC GCGCTGTCGG TGCGCTGGCT GAACATGGAG CTGCACGCCA AGGCCGCCGA CCACGCCCAG ATCACGCGCG CCTTCATCGA GGGCGACCCC TCGGTGGGGC AGATGCTCAG CGACCACGTG CTCAACTACG TGGAGGCGGC GCTGAAGTCC CACGAGAGCG CCCGCTGA
|
Protein sequence | MVDLPQLPDD PSKLAREPLR EQIRQVLVEG LLSGRWQPGE RIVERRVATE LRVSQAPVRE ALRELETLRL IETVPNKGAR VRAFGVQDMA EIYPVRAGLE LVAAQLAAPR LAEDPSPLER EVEALQRATA QGDVSEQIRH SVEFHREVVR AAHNSVLLHT WESLGVEVWT ALSVRWLNME LHAKAADHAQ ITRAFIEGDP SVGQMLSDHV LNYVEAALKS HESAR
|
| |