Gene Ndas_4652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4652 
Symbol 
ID9248534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5526502 
End bp5527161 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content72% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003682544 
Protein GI297563570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0949639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC CGATCCGGGT CCTGGTCTGC GACGACCAGG TGCTGATCCG CACCGGCCTC 
GTCACCATCA TCGACGCCCA ACCCGACCTG GAGGTCGCCG GCGAGTGCGG GGACGGCGCG
GCCGCCGTCG AACTCGCCGA GCGGCTGCGC CCCGACGTCG TGGTGATGGA CGTGCGCATG
CCCGTGCTCG ACGGCATCGA GGCCACCCGG CGCCTGGCCG GGGCCGGGGT GGACCGTCCC
GTCAAGGTCC TGGTGGTCAC GACGTTCAAC CTCGACGAGT ACGTCTACGA GGCGCTGCGC
GCGGGCGCCA GCGGGTTCCT GCTCAAGGAC GCGCCCCCGG CCCAGCTGCT GCACGGCATC
CGCACCGTGT CCACCGGCGC GGCCCTGCTG GACCCCGAGG TCACACGACA GCTGGTGGGC
AGGTACGCCG CACGGATCCG GCCCCCCGAC GCCGCCGCGG CCGACGCCCG GCTGACCCCC
CGCGAGCTGG AGGTCCTGCG CCTGATCGCC AACGGCCTGT CCAACGGCGA GATCGCCGCG
AGCCTGTTCA TCAGCCAGGA GACCGTGAAG ACGTTCGTCT CGCGCATCCT GACCAAACTC
GACCTGCGCG ACCGCGTCCA GGCCGTGGTC TACGCCTACC GGCAGGGGCT GGTGACCTGA
 
Protein sequence
MSAPIRVLVC DDQVLIRTGL VTIIDAQPDL EVAGECGDGA AAVELAERLR PDVVVMDVRM 
PVLDGIEATR RLAGAGVDRP VKVLVVTTFN LDEYVYEALR AGASGFLLKD APPAQLLHGI
RTVSTGAALL DPEVTRQLVG RYAARIRPPD AAAADARLTP RELEVLRLIA NGLSNGEIAA
SLFISQETVK TFVSRILTKL DLRDRVQAVV YAYRQGLVT