Gene Ndas_4136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4136 
Symbol 
ID9248010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4938353 
End bp4939132 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content64% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003682037 
Protein GI297563063 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCAAG ATCACTTCTC CTCCCTGCTC ACAACGTTTC GCGATTTCTC CGGGAGAACG 
CAGAAACAGC TGGCCTTCGA CATGGGCACG TCACCCGCGT CCGTGTCCCG GTGGGAGTCG
GGGAAGTTCA CGCCCAGGGT GGAGACCGCC GAGGCCCTGG ACCGGATGCT CAAGGCGGAC
GGCAGGCTCC TCAAGGCGTG GCGCAAGCAG ACCTCGGGGA CGGAGCTGCC GGTGTGGCAG
CTGAACGTGG CCCGGTTGCA GGAGCAGGCC GTGGCCATCG ACTGCCTGTC ACCAGTGCTG
GTTCCGGGTG AACTCCAGTG TTCCTCCTAC GCCGAAGCCG TCTTCAAGGA CGGACAGCCG
CTCGTTGGCG ACGCAGAGGT GGACCGCTGG GTCAGCGCTC GTTGCGGACG CCTCAAAACA
CTTCGCGAGC ACCACCACGA CCCGGTGGTG ACCTCCGTCT TCCCGCACAG CGCTCTGACC
TGCATGCCGG ATCACATCCG GAAGGAACAG GCAGGGCATC TGTTGCGGCT GGTGGAAGAC
GTGCGCGTCG AGGTTCACTT GCTGTCACCG GGAACGTCTC TCATCGGAGT GACCGCGCCA
GTCAACCTGT ACCGACTCCT TGATGGCGGC CTGGCCGTCT CCAGCGACTA CATCGCGGGG
AACGTCATCC TGGAATCCGA CAGCCATCCG CGCATGGAGG CGCTGGTAAG AAAGTGTCTG
GCGTCCGCGC TGCCCGCTAG AGAGTCCCGG CAGCTGTTGA GGGAATTGGA AGCAGCATGA
 
Protein sequence
MTQDHFSSLL TTFRDFSGRT QKQLAFDMGT SPASVSRWES GKFTPRVETA EALDRMLKAD 
GRLLKAWRKQ TSGTELPVWQ LNVARLQEQA VAIDCLSPVL VPGELQCSSY AEAVFKDGQP
LVGDAEVDRW VSARCGRLKT LREHHHDPVV TSVFPHSALT CMPDHIRKEQ AGHLLRLVED
VRVEVHLLSP GTSLIGVTAP VNLYRLLDGG LAVSSDYIAG NVILESDSHP RMEALVRKCL
ASALPARESR QLLRELEAA