Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4093 |
Symbol | |
ID | 9247967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 4890867 |
End bp | 4891469 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003681995 |
Protein GI | 297563021 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.370117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.493128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACGTG GTGTCGCCAT CCCCGAACTC AGGCAGCGGC TCTTCTCCGC GGTCGAGCGG GTGATCGTCC GGGAGGGGCC GGGCGGCCTC AGCGGCCGGG CCGTCACACG CGAGGCCGGT GTCGCCACCG GGCTGCTCTA CGCCCACTTC GCGGACACCG ACGACTTCCT GGCCGCCTAC GCCGTCGACC GGGGCTTCCA GGTCTGCGCC GGGGCCGCGT CCCTGCCGGG GCGCGCCGGT ACGGGCGCGG TCGCGGACAA CCTGGCCGAG GCCGTGCTGG CGACCCCGCC GACGGTCCTC CTGGCGCTGA CCAGGCTCAT GGCCTCCCGG CCGGAGCTGG CCGGACGCGT GCGCGCGGTC CTCGGCGACC GCACGGCCGG TCTGGAGGCG GTCGAGACCG CGGCCGCGGA CTACCTCACC GCGGAGCGGC GCCTGGGGCG CCTCCACGGG AGCGCCGACC CCGAGGCGCT GGCGCTGGCG GTGGTCGGCG CGGTCCACCA CCTCGTGCTC ACCGGCGCGC GGGACTCCGC GGTCGGCGGC CGGGTCCGGC GGACGGTGGC CGCGCTGCTC GCGGGTTTCA CGGAGGTGGC CGACCGACGG TGA
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Protein sequence | MPRGVAIPEL RQRLFSAVER VIVREGPGGL SGRAVTREAG VATGLLYAHF ADTDDFLAAY AVDRGFQVCA GAASLPGRAG TGAVADNLAE AVLATPPTVL LALTRLMASR PELAGRVRAV LGDRTAGLEA VETAAADYLT AERRLGRLHG SADPEALALA VVGAVHHLVL TGARDSAVGG RVRRTVAALL AGFTEVADRR
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