Gene Ndas_4093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4093 
Symbol 
ID9247967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4890867 
End bp4891469 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content78% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003681995 
Protein GI297563021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.370117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.493128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGTG GTGTCGCCAT CCCCGAACTC AGGCAGCGGC TCTTCTCCGC GGTCGAGCGG 
GTGATCGTCC GGGAGGGGCC GGGCGGCCTC AGCGGCCGGG CCGTCACACG CGAGGCCGGT
GTCGCCACCG GGCTGCTCTA CGCCCACTTC GCGGACACCG ACGACTTCCT GGCCGCCTAC
GCCGTCGACC GGGGCTTCCA GGTCTGCGCC GGGGCCGCGT CCCTGCCGGG GCGCGCCGGT
ACGGGCGCGG TCGCGGACAA CCTGGCCGAG GCCGTGCTGG CGACCCCGCC GACGGTCCTC
CTGGCGCTGA CCAGGCTCAT GGCCTCCCGG CCGGAGCTGG CCGGACGCGT GCGCGCGGTC
CTCGGCGACC GCACGGCCGG TCTGGAGGCG GTCGAGACCG CGGCCGCGGA CTACCTCACC
GCGGAGCGGC GCCTGGGGCG CCTCCACGGG AGCGCCGACC CCGAGGCGCT GGCGCTGGCG
GTGGTCGGCG CGGTCCACCA CCTCGTGCTC ACCGGCGCGC GGGACTCCGC GGTCGGCGGC
CGGGTCCGGC GGACGGTGGC CGCGCTGCTC GCGGGTTTCA CGGAGGTGGC CGACCGACGG
TGA
 
Protein sequence
MPRGVAIPEL RQRLFSAVER VIVREGPGGL SGRAVTREAG VATGLLYAHF ADTDDFLAAY 
AVDRGFQVCA GAASLPGRAG TGAVADNLAE AVLATPPTVL LALTRLMASR PELAGRVRAV
LGDRTAGLEA VETAAADYLT AERRLGRLHG SADPEALALA VVGAVHHLVL TGARDSAVGG
RVRRTVAALL AGFTEVADRR