Gene Ndas_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3947 
Symbol 
ID9247818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp4720763 
End bp4722064 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content70% 
IMG OID 
ProductHNH endonuclease 
Protein accessionYP_003681850 
Protein GI297562876 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAG CGCACGAGGC GGCCCCCGGG GAATGTTCCC CGGCCGTGGC CGCTCTGGCC 
GGTGCGCACA AGATCATCCA CCAAGCGTTG AACGCCGAAG TCCCGCCCGG AGCCGACGAG 
GCCGCCGCGG AGGAGATCGC GGCGCTGTGG GCGCAGCTGG ACCAGATCCG CTATCAGGCG 
TTGGCACAGA TGGCGCGCCT GTACGCACGT GGTGAGGTCG CCCGCTACAG CGGCTACTCC 
ACGTTGGACA AGTGGATCAC CCACCGCTGC AAGGTCCCCG CCGCTCAGGC CAAGGATTTG 
GCTCGTTTGG CCCAGCACGT GCAGGAGGAG ACGCTGCCCG CCACGGTGGA AGCGGTGGAG 
GAGGGCGCTC TGGCTTTGGG TGAGGCGGTC GCGATCGCCA AAGCCACTGA CAAGGCCGTC 
CAGACCCGCG ACGCCCAACA TTTCCCCGAT CAGGGGGAGT ATCGGCAGGG GTTCGAAGCG 
GCGCTGGTGG CCGCGAAGGC GGAGCGGCCC GCGTTGTCGG TCAACCAGCT CCAGTCGGTG 
GCCCGCCAGG TCGCCTACCG TTTGGACCGC CACCGCCTGG ACCGCGACCA CGAAGCCGCT 
CACGCCGCCC GTGGACTGAC GGTCCATGAC ACGTTCCAGG GCAGCTACCA GCTCCAGGCC 
TGGGGCGGCA GTGGGGATGC GTTGGTCGTG CGCGCGGCCA TCGACACCTT CACCACCCCA 
CCCTCGGACC AGGACACCCG GTCCCGGTCC CAGCGCGAGC ACGACGCGCT CATCGCGGCG 
CTGCGTTTCG CCACCACCCA CACCGGATGC GCCAACGCTC CGGCTCCGTT GGCACAGATC 
CGCATCGTGG TGCCCGTGCA GACCTACCTG GACGCCCAAG GCCAAGAGGT TCCCGCGTTG 
GACGAGCACG GTCGAGTGAT TCCGGTCGGG CTGGTCCACG AGTTGGCCGC CGATTCCGAG 
GTGGTGCGGA TGCTCACCGC ACCGCCCACC GGACAGGTGC TGGATGTGGG CCACAGCCGC 
CGCCTGGCCT CAACCCGCCA ACGCACCGCC GCCTTCCACG GACACGCCAC CTGCGCCCAC 
CCGGGCGGAT GCGAAGTGCC AGTCGCCCTC TGCCAAGCCG ACCACGTGCA GTCGTTCTCC 
CGAGGCGGAC GCACCGTGGT CGCCAACCTC CAACCTCTGT GCGGGCCGCA CAACCGGGCC 
AAGTACCAAC GCGAACTGCG CACACACCAC CAAGGACAGC GGCGGGAACG GGGAGGAGAC 
CACCCACCCG GCGGGGAGCC GGATCCACCA CCCCGGGAAT GA
 
Protein sequence
MIAAHEAAPG ECSPAVAALA GAHKIIHQAL NAEVPPGADE AAAEEIAALW AQLDQIRYQA 
LAQMARLYAR GEVARYSGYS TLDKWITHRC KVPAAQAKDL ARLAQHVQEE TLPATVEAVE 
EGALALGEAV AIAKATDKAV QTRDAQHFPD QGEYRQGFEA ALVAAKAERP ALSVNQLQSV 
ARQVAYRLDR HRLDRDHEAA HAARGLTVHD TFQGSYQLQA WGGSGDALVV RAAIDTFTTP 
PSDQDTRSRS QREHDALIAA LRFATTHTGC ANAPAPLAQI RIVVPVQTYL DAQGQEVPAL 
DEHGRVIPVG LVHELAADSE VVRMLTAPPT GQVLDVGHSR RLASTRQRTA AFHGHATCAH 
PGGCEVPVAL CQADHVQSFS RGGRTVVANL QPLCGPHNRA KYQRELRTHH QGQRRERGGD 
HPPGGEPDPP PRE