Gene Ndas_3538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3538 
Symbol 
ID9247407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp4248813 
End bp4249649 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content75% 
IMG OID 
ProductLuciferase-like, subgroup 
Protein accessionYP_003681445 
Protein GI297562471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.240263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.716857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGT TGACCGAACC GATCACGGGA ACGCCCCTCC AGGTGGTCCT GCCCGACGAG 
TCCGTGCGGA TGTCACCGAG AACCCTCGTC GAACTGGGGG TTCGCGCCGA GGAGCTGGGC 
GTGGACGCGG TGTGGCTGCC CGACCACCTG CTGCCGCCCG CGCCGTACGG CCGCACCTTC 
GGCGGCGTGT ACGAGCCGCT GGTGGCCCTG GCCCACCTGG CGGCCCTGAC CCGGCGGATC 
CGACTGGGCA CGTCGGTGCT GGTGGCGCCG ATGCGCGACC CGTTCGTGCT GGCGAAGCAG 
GTGGCGACCC TGGACGCCCT GTCCGGGGGG CGCTTCGTCC TGGGTGTGGG GACCGGCTGG 
TCGCGCGAGG AGTTCGAGGC CGTGGGGTCG GACTTCGCCA CGCGCGGCGC CCGGACCGAC 
GAGACGCTGC GGCTGCTGCG GCACCTGTTC GAGGGCGAGG GGCCGTTCGA GGGGCGCTTC 
CACTCCTACG AACGCGGGGT GTTCGCGCCC CGTCCGGCGC GGCGCGTACC CGTGATGGTG 
GGCGGCACGT CCGACCGGGC GCTGCGGCGG GCCGCCGAGT GGGCCGACGT GTGGCAGGGC 
GTGGGACTGG ACACGGCGGG GTTCGTGGAG GCCCGGAACC GGCTGCGGGA GCTGACCCCG 
CGGCCGGTGC GCGCGGGAAC GCGGATCGCC TGGTCCGGTG GCGAGGAGGA GTTCGAACGC 
GCCGTCGGGC TGTTCCGGGA GCTGACGGCC GCCGGAGCGG ACGCGGTGGC GGTGTGGTTC 
GGCGACGCGG AGGGCTTCGG CGAGAGGATG GAGCGGTTCG CGGCGGCACT GCGCTGA
 
Protein sequence
MSELTEPITG TPLQVVLPDE SVRMSPRTLV ELGVRAEELG VDAVWLPDHL LPPAPYGRTF 
GGVYEPLVAL AHLAALTRRI RLGTSVLVAP MRDPFVLAKQ VATLDALSGG RFVLGVGTGW 
SREEFEAVGS DFATRGARTD ETLRLLRHLF EGEGPFEGRF HSYERGVFAP RPARRVPVMV 
GGTSDRALRR AAEWADVWQG VGLDTAGFVE ARNRLRELTP RPVRAGTRIA WSGGEEEFER 
AVGLFRELTA AGADAVAVWF GDAEGFGERM ERFAAALR