| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3480 |
|---|
| Symbol | |
|---|
| ID | 9247349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 4171103 |
|---|
| End bp | 4172278 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | ABC-type Fe3+ transport system periplasmic component |
|---|
| Protein accession | YP_003681387 |
|---|
| Protein GI | 297562413 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACTT CGAGACTGCT CTCCGCCTCC GTCGCCCTCC CGCTCGCCGT GACGCTCGCC
GCCTGCGGCG GCGGCACCCC CGAGGCCGCC GACACCGCCG ACGCCGGCGA GGCCGCCCAG
CCCCACGAAC TCGACGACGC CACCCACGAG GAGCTGGTCG AGCTGGCCAG GGAGGAGGGG
GAGGTCACCG TCTACTCCTT CACCTCGCGC ATCGCCTCCG TCGAGGAGGC CTTCGAGGAG
GAGTACCCGG GCGTCGACCT CATCGGCCAC GACATCGCCT CCTCCGAGCA GATCACCCGC
CTCCAGTCCG AGGCCCAGGC CGGAACCCCG TCGGCGGACG TCGCCTACAT TTCCGACGCC
CCGGTGGTCA TCACCGAACT CGTCTCGGGC GGCATCCTCC AGAACCACGT CCCCCAGCGC
GTCGCCGAGA CCGTGCCCGA GGAGTACCGG CAGCCCCTGC TGGCCAACCG GCTCTCGACC
AAGATCCTCA TGTACAACGA GGAGGCCCAC CCCGACGGCA GCCCGGTCCA GAACCTGTGG
CAGCTGACCG AGGAGGAGTG GAACGGCCGG GTCGTCATGG TCGACCCGAG CGTGCGCGGC
GACTACCTCG ACCTCATGGC GGAGATCGTC CGGCGCTCCG ACGAGATGGC GCAGGCCCAC
CAGGAGCACT TCGGGTCCGA GGTCGAACTC GACGAGGGCG TGGAGAACGC CGGGCAGCAG
TTCATCAAGG ACCTCTACGC CAACGGCCTG GTCCTGGTCG ACGACACCGA CAACGTCAAC
GCGGCCGTGG GCGCGACCGG GCAGGAGGAC CCGCCGGTCG GCATCACCTC CTACTCCGAC
CGCCGGGACA ACGAGGAGGA GGGCTGGGCG CTCCAGGCCT CCCTGGGGAC CGCGCCGTCG
CTGGGCATCA CCTTCCCGGC CTACATCGGC ATGGTGCAGG GCTCCGACAG CCCGGCCGCC
GCGCGCCTGG TCGCCGACTT CCTCATGGGC GACGACTCCG CGACCGGCGG TCCCGGATAC
GAGCCCTTCT ACGTCCCCGG CGACTACCCG GTCCGCACGG ACATGGAGAT GCCCGAGGAC
GCCGCGCCCC TGGACGAACT GGGCGCCTGG GACATCGATC CCGAGGAGAC CGCCCGGGTC
CGCGACGACG TGGCCGACTT CCTGCTCACC CTGTAA
|
|---|
| Protein sequence | MRTSRLLSAS VALPLAVTLA ACGGGTPEAA DTADAGEAAQ PHELDDATHE ELVELAREEG
EVTVYSFTSR IASVEEAFEE EYPGVDLIGH DIASSEQITR LQSEAQAGTP SADVAYISDA
PVVITELVSG GILQNHVPQR VAETVPEEYR QPLLANRLST KILMYNEEAH PDGSPVQNLW
QLTEEEWNGR VVMVDPSVRG DYLDLMAEIV RRSDEMAQAH QEHFGSEVEL DEGVENAGQQ
FIKDLYANGL VLVDDTDNVN AAVGATGQED PPVGITSYSD RRDNEEEGWA LQASLGTAPS
LGITFPAYIG MVQGSDSPAA ARLVADFLMG DDSATGGPGY EPFYVPGDYP VRTDMEMPED
AAPLDELGAW DIDPEETARV RDDVADFLLT L
|
|---|
| |