Gene Ndas_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3110 
Symbol 
ID9246966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp3724565 
End bp3725647 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content74% 
IMG OID 
ProductPolyprenyl synthetase 
Protein accessionYP_003681025 
Protein GI297562051 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.645285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCCTT CCTCTTCCCC GTCCGCCTCC GCCGTCTTCG CGGCCCGCTC CGGTGTGGAC 
CGCGAACTGA CCTCGTTCTG CGCCGGCCAC CGGGCCCAGC TGCTGGAGAT CGGGGAGGAG 
CTGGCACCGG CCATGGACGC GCTGGAGGCG ATGATCTCCG GCGGCAAGCG CCTGCGGCCG 
ACCTTCTGCT ACTGGGGCTG GCGGGGCGCG GGCGGCGCGG CCGAGGACGA GCGGGTGGTG 
CGGGCGGCGG CCTCCCTGGA GTTCCTCCAG GCGTGCGCGC TCGTCCACGA CGACGTGATC 
GACAACAGCG ACACCCGGCG CGGCCTGCCC GCCACGCACA AGCGGCTGGC CAAGCTGCAC 
GCCGACCAGG GGTGGAGCGG CGACAGCGAG GGCTTCGGGC AGGGCGCGGC CATCCTCATC 
GGCGACCTGT GCCTGGCCTG GTCGGATGAG ATGTACCAGG CCAGCGGCTT CCCGACGGAG 
GTGCTGGGCC GGGGGCGGCC CCCGTTCGAC GCGATGCGCA CCGAGGTCAT GGCCGGGCAG 
TACCTGGACA CCCTGGAACA GGTGCGGGGC ACCGGCACAC GCGAGGCGGC GCTGCGCGTG 
ATGCGCTACA AGTCCGCCAA GTACACGGTG GAGCGCCCGC TGCACCTGGG CGCGGCCCTG 
GCGGGCCGCC ACGGGGAGCT GGCCGGGGTC TACACCGACT ACGGCATCCC GCTGGGGATC 
GCCTTCCAGC TGCGCGACGA CGTGCTGGGC GTGTTCGGCG ACCCGTCCAC CACCGGCAAG 
CCCGCCGGGG ACGACCTGCG CGAGGGCAAG CGGACGCTGG TCGTGGCCGA GACCCTGGCG 
CGCGCCGGGG CGGCCGACGC CGAGCGGTTC CGCTCGCTGC TGGGGGCGCC GGACCTGTCG 
GTGGCCTCGG TGGAGTGGAT GTGCTCCCTG ATCGAGGGCT CGGGCGCGCT GGCCGCGTGC 
GAGGAGATGA TCGCGGAGTA CGCCGACCGG GCCGTCGCGG CCCTGGAGAG CCCCGAGCTG 
GACGCGTCCG CCCGCGAGCC GCTGCGCCAG CTGGTCGTGG CCGCCACCTC GCGCTCCTTC 
TGA
 
Protein sequence
MVPSSSPSAS AVFAARSGVD RELTSFCAGH RAQLLEIGEE LAPAMDALEA MISGGKRLRP 
TFCYWGWRGA GGAAEDERVV RAAASLEFLQ ACALVHDDVI DNSDTRRGLP ATHKRLAKLH 
ADQGWSGDSE GFGQGAAILI GDLCLAWSDE MYQASGFPTE VLGRGRPPFD AMRTEVMAGQ 
YLDTLEQVRG TGTREAALRV MRYKSAKYTV ERPLHLGAAL AGRHGELAGV YTDYGIPLGI 
AFQLRDDVLG VFGDPSTTGK PAGDDLREGK RTLVVAETLA RAGAADAERF RSLLGAPDLS 
VASVEWMCSL IEGSGALAAC EEMIAEYADR AVAALESPEL DASAREPLRQ LVVAATSRSF