| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3054 |
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| Symbol | |
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| ID | 9246910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 3648031 |
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| End bp | 3650520 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | putative sensor with HAMP domain |
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| Protein accession | YP_003680970 |
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| Protein GI | 297561996 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAACA CGGGAGGCAC CGGCCGCAGC GCCATCAGGG CTCAGATCAA CAGGATCGTA
CTGATCCCCA GCATCACCTT CCTGGCGCTG TTCGTCGTCC TCAGCACGGC CACGCTCGTC
CAGGCCGTGT CGCTGCGCTC CTCGGTCGGC GACGGCCGCG CCGGGATCCG GCTCGCCGCG
GCGCTCACCC TTCTCCAGGA GGAGCGCCGC CTGAGCGCCG CCTACCTCGC CGACCCCGCC
GAGGACGGCC GCGCCGCCCT GTCCGACGCG GCCTCGCGCA CCGACGAGGC ACTCGTCCCC
GTCCACGACC TGCGCGGCAC CATCGGCGAC CGGGACGACC CGGCCACCGA ACCCCTCGCC
GAGGACTTCT TCACCTCCCT GACCGAGGCC ACGGAACTGC GCGCCCAGAA CCTCGCCGAG
CCCGGTCCAC CCGAGGAAGC CCTCACCGCC TACACCACCG CGATCGGACA GGGCATCCGC
CTCTACGCCG GCACCGCCCG CTCCCTCGAC AACGGGCCCG CCACCGCCGA GGCCGCCGCC
GTCACCGACC TGATGTGGGC CCAGGAGAGC TTCAGCCGGG CCGACGCCCT CATCGCGGCC
GTGCTCGCCG AGGACTCCCT CGACCGCTTC CAGCAGGCAC AGGTCGTCGC GCTCACCGCG
GACGCCCGCC ACCGCGTCGA CATGGCCCCT CCCGGTCCCG CCGCAGACGA CGGCGAGCCC
CCCGCCCTGA CCGCACTCGC CGAGAGCCGC CCCTGGCAGG ACGCCCTGGC CATCGCGGAC
ACCCTCGCCA CCCACGAGGC CCCGGTCATC GTGGACGTCC TCAGCGGCGA ACAGACCCGG
GACCCGACGC CGCCCGAGGG GCTCGGGGGC TGGCGCGAGG CCGCCGACCA GGTCAACGCC
GAACTGGCCG ACATCACCGC CACGCGCGCC GCCTCCGTCG TCACCGCCAC CGAGCAGGCC
AGTTCCTGGA TGCTCACCCT CGCGCTGGGC GGCAGCATCA CCTCCCTGTT CGCGGGCACC
CTCGCCTACG GTGTGGCCGC CCGCTCCGCC GGACGCCTCA CCCACCGGCT CGCCCAGCTG
CGCGCCGACA CCCTGGGCAG CGCGCGCAGC GACCTGCCCC GTATCGTGCG CCGCCTGGAG
TCGGGGGAGC AGGTCGACCT CGACACCGAG ATGAAGCAGC TCGACCACGG CGACGACGAG
GTCGGCCAGG TCGCCGACGC CTTCAACATC GCCCAGCGCA CCGCCGTCGC CGCCGCCGTC
AAACAGGCCG ACATCCGCGC GGGCGTCAAC CGGGTCTTCC TCGGCATCGC CCACCGCCAC
CAGTCCCTCC TCCAGCGCCA GCTCCAGCTG CTGGACCGCG TCGAGCGCGA GGAGGAGGAC
CCCGACCTGC TGGAGAGCCT CTTCCAGCTC GACCACCTGG CCACCCGGGG CCGCCGCCAC
GCCGAGAACC TCATCATCCT GGGCGGCGCC CAGCCCGGCC GCCGCTGGCG CCACCCCGTC
CCGCTCGTGG ACATCCTGCG CGGCGCGATC TCCGAGACCG AGGAGTACAC CAGGGTCCGA
CTGACCTCCG TCCCCGACCT GTCGCTGTCC GGCGCCGCGG TGGCCGACGT CATCCACATG
CTCGCCGAGC TGGTCGAGAA CGCCACCGCC TACTCGCCGC CGCACACCCA GGTCACCATC
GCCACCGAGT CCGTGCCCAA GGGCGTGGCC GTGGAGATCG AGGACCGGGG CCTGGGCATG
ACCGAGGAGG TCCTGACCAG CTCCAACCGC ACCCTCAGCG AGGCGCCCGA GTTCGACGTC
ATGACCTCCG GCGGGGACTC GCGCCTGGGC CTGTTCGTCG TCGCCCGCCT CGCCGCCAAA
CACGACATCC GGGTGCAGCT GCGGCACTCG CCCTACGGCG GGACCCGGGC CGTGGTGCTC
ATCCCCGGCG CCCTGGTCGC CTCCTCGTCC AGCGCCCCGG AACGGCCCCG CGCGGCCATC
CGCCAGGGCG CCCACTCGGT ACTGCGTGAG CCGTCGGCGC AGCACGGTGA CGCGCTCACC
ACGCAGGACG CCCCCCACCG GAGCCGGCCG CTCCTGCGTC CGGTCCCCCG CGACGGCGAC
GGCGCACGCC CGGCCCGGGG CACGCCCCTG CTGCGCCGGG TACCGGCGCC CGTGCCCGAC
TCCGAGACCG CGGACGCCGC TCCCGGGACC GAACCCGGGT CCGGCCGGGT CGGCGCCGCA
CCCGGTCGCC CCGGACTTCC CCGGCGCAGG CGCCAGGCCA GCCTCGCCCC CCAGCTCAGA
GCCGCGGACC CGCCGGAGTG GGACGACGCC GACCCCCCGG GCTCCTCACG GCGCACCCCC
GAACAGGCGC GGCAGATGAT GGACGCCTTC AGCGCCGGTA CCCGGCGCGG CCGGGCCGCG
GACATCGGGG TCGACGCCGA CGGACGTGAA CACAGCAGTG ACGGTCAGGT CGGTGCGAGC
GCCGACGATC ACACGGGAGA AAGCGACTGA
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| Protein sequence | MGNTGGTGRS AIRAQINRIV LIPSITFLAL FVVLSTATLV QAVSLRSSVG DGRAGIRLAA
ALTLLQEERR LSAAYLADPA EDGRAALSDA ASRTDEALVP VHDLRGTIGD RDDPATEPLA
EDFFTSLTEA TELRAQNLAE PGPPEEALTA YTTAIGQGIR LYAGTARSLD NGPATAEAAA
VTDLMWAQES FSRADALIAA VLAEDSLDRF QQAQVVALTA DARHRVDMAP PGPAADDGEP
PALTALAESR PWQDALAIAD TLATHEAPVI VDVLSGEQTR DPTPPEGLGG WREAADQVNA
ELADITATRA ASVVTATEQA SSWMLTLALG GSITSLFAGT LAYGVAARSA GRLTHRLAQL
RADTLGSARS DLPRIVRRLE SGEQVDLDTE MKQLDHGDDE VGQVADAFNI AQRTAVAAAV
KQADIRAGVN RVFLGIAHRH QSLLQRQLQL LDRVEREEED PDLLESLFQL DHLATRGRRH
AENLIILGGA QPGRRWRHPV PLVDILRGAI SETEEYTRVR LTSVPDLSLS GAAVADVIHM
LAELVENATA YSPPHTQVTI ATESVPKGVA VEIEDRGLGM TEEVLTSSNR TLSEAPEFDV
MTSGGDSRLG LFVVARLAAK HDIRVQLRHS PYGGTRAVVL IPGALVASSS SAPERPRAAI
RQGAHSVLRE PSAQHGDALT TQDAPHRSRP LLRPVPRDGD GARPARGTPL LRRVPAPVPD
SETADAAPGT EPGSGRVGAA PGRPGLPRRR RQASLAPQLR AADPPEWDDA DPPGSSRRTP
EQARQMMDAF SAGTRRGRAA DIGVDADGRE HSSDGQVGAS ADDHTGESD
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