Gene Ndas_2845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2845 
Symbol 
ID9246696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3395249 
End bp3396031 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003680762 
Protein GI297561788 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAC CGCAGCTGGA CCGGGTGGCA GGGGGGCCGA GCCGCCGCGA GCGTGTGCGC 
GAGGCCACAT TGGCGGAGAT CAAGGGGATC GCCCGCCGGC ACCTGGTCGA GCACGGGTCC
GGCGGGGTGT CCCTGCGCGC CATCGCCCGG GAGATGGGGA TGACCGCGCC GGGGCTGTAC
CGCTACGTGA CGGGGATCGA CGCGCTGCTG GTGCTCATCA CCGCGGACAT GTTCCAGGAA
CTGGGCGACG CGGTGGCCGC GGCGGACGCC AGCGTGCCCG CCGAGGACAC CGACCTGCGC
ATCCTCACCT CGCTGCGGGC CTTCCGGGCC TGGGCGATCG GGCACCGGGC CGAGTTCGCC
ACGATGTTCG GTCCGCGCGT GCGCCTGGCC CCCGAGACCG ACGTCACACC GGCGGTGGAG
GCCGGGCGGC GCTTCGGGGC GACCTTCTAC ACCCTCTTCG ACCGGCTTCT GTCGGAGGAG
AGGTTCGTGC TGCCCGACGG GGACCGCATC ACCCCGGAGC TGGCCCGCGA TCTGCGCGCC
TTCGCCGACA CCTGCGGCTT CTCGGCGCCG CACATCCCGG TGGAGGCGGT CATGGTGCTC
AGCACGTGCT GGGTACGCCT GTACGGGGTG GTGTGCATGG AGGTGTTCGA GCACCTCGAC
TTCGTGATGC GCGACATGGA ACCGCTCTTC GAGTCCGAGC TCCAGAACAT GCTGACGGGC
CTGGGGGTTC GCTACCGGCC GCCGGAGAGC AGCGCCCCCA CGACCATGGG TACGTCCGGT
TAA
 
Protein sequence
MAKPQLDRVA GGPSRRERVR EATLAEIKGI ARRHLVEHGS GGVSLRAIAR EMGMTAPGLY 
RYVTGIDALL VLITADMFQE LGDAVAAADA SVPAEDTDLR ILTSLRAFRA WAIGHRAEFA
TMFGPRVRLA PETDVTPAVE AGRRFGATFY TLFDRLLSEE RFVLPDGDRI TPELARDLRA
FADTCGFSAP HIPVEAVMVL STCWVRLYGV VCMEVFEHLD FVMRDMEPLF ESELQNMLTG
LGVRYRPPES SAPTTMGTSG