Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2683 |
Symbol | |
ID | 9246534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3197345 |
End bp | 3198055 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | transcriptional regulator, Crp/Fnr family |
Protein accession | YP_003680604 |
Protein GI | 297561630 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.168298 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGACAGGC ACGGCTTCGG AGAACTGGTC ACCGACGAAC AGTGGGAGCG GTTGACCGCG TCGGCGATGA CGCGGAGGTT CGCCCGGGGG GAGGCGCTCC TGCGGCAGGG CGAGGTCGGC GGAGGGGTGC ACCTCATGCT GAACGGCCGC GCCAAGGTGG TCTCCATCAG GGCCGACGGC TCCTGCGTCC CCCTGGCCTT CCGCACCCGC GGGGAGATGC TGGGGGAGTC CGTCCTCGCC GGGGCCGAGC GCCCCAGGAA CGCCACGGTC ACGGCCCTGT GCCCGAGCAC GACCGCCTTC CTCCCCGCGG ACCGCTTCCG CAGGGTCGTG GACGAACTCG ATCTGGGAAG CGCGCTGTGG CACAGCGCCC TCATGCGTCA GGACGAGGGC GACCGACTCA GGGTGCAGCA GGCCTCCCTT CCCGCCGACC GCAGGCTGCC CGCCGCCCTG CTCCATCTCG CCTCGGTGAT GGGCGAGCCC CTCCCCGCAC CCGTGTCCGA GGACGGCGCG CCGGTCACGC GCGGATGCCT GTTGGGGGTC CCTCTGGCCC AGAGCGAGAT CGCCGGATTC GCGGGCATGT CGCGTACCTC CCTCCACCAC GCCTACACCT CCCTCCGGGA GCGGGGCGTC ATCCGCACCG GACGGCAGTA CGTGGCCATC CTCGACCTGG AGGCGCTGGA GGCCCTGGCG GCCGGAGACG AACCGGTGTG A
|
Protein sequence | MDRHGFGELV TDEQWERLTA SAMTRRFARG EALLRQGEVG GGVHLMLNGR AKVVSIRADG SCVPLAFRTR GEMLGESVLA GAERPRNATV TALCPSTTAF LPADRFRRVV DELDLGSALW HSALMRQDEG DRLRVQQASL PADRRLPAAL LHLASVMGEP LPAPVSEDGA PVTRGCLLGV PLAQSEIAGF AGMSRTSLHH AYTSLRERGV IRTGRQYVAI LDLEALEALA AGDEPV
|
| |